FN1024-S Chr1 11358672 11358672 0 0 Insertion 2 FN1024-S Chr1 16300647 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr1 17538979 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr1 18144472 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr1 18369455 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr1 18829359 18829361 0 0 Deletion 2 FN1024-S Chr1 19371433 19371505 0 0 Deletion 72 FN1024-S Chr1 29049966 29049975 0 0 Deletion 9 LOC_Os01g50600 expressed protein FN1024-S Chr1 4095879 4095887 0 0 Deletion 8 LOC_Os01g08350 ATP synthase subunit alpha, mitochondrial, putative, expressed FN1024-S Chr1 5384481 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1024-S Chr1 581000 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr1 6776486 6776487 0 0 Deletion 1 LOC_Os01g12400 S-locus lectin protein kinase family protein, putative, expressed FN1024-S Chr10 11743618 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr10 1222901 Chr8 16258229 0 Translocation 0 FN1024-S Chr10 15038327 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr10 16561166 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr10 17033949 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN1024-S Chr10 2165624 2165626 0 0 Deletion 2 FN1024-S Chr10 3166337 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1024-S Chr10 9514978 9514981 0 0 Deletion 3 FN1024-S Chr11 11537183 Chr8 7441757 0 Translocation 0 LOC_Os08g12570 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr11 11579450 Chr2 27655695 0 Translocation 0 FN1024-S Chr11 11643136 Chr2 27655651 0 Translocation 0 LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr11 11643228 Chr3 15725439 0 Translocation 0 LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr11 1203597 1203935 0 0 Deletion 338 FN1024-S Chr11 17856271 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr11 20908358 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr11 24016098 24016098 0 0 Insertion 2 FN1024-S Chr11 25109812 25109816 0 0 Deletion 4 FN1024-S Chr11 7580726 7580743 0 0 Deletion 17 LOC_Os11g13790 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr11 7819774 7819780 0 0 Deletion 6 FN1024-S Chr11 8344715 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr11 916717 925830 0 0 Inversion 9113 LOC_Os11g02778 transposon protein, putative, unclassified, expressed FN1024-S Chr11 916717 925830 0 0 Inversion 9113 LOC_Os11g02780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr12 12448502 24680510 0 0 Inversion 12232008 FN1024-S Chr12 17574050 17574067 0 0 Deletion 17 LOC_Os12g29520 auxin response factor, putative, expressed FN1024-S Chr12 18350022 18350022 0 0 Insertion 2 FN1024-S Chr12 25801249 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1024-S Chr12 25813217 25813217 0 0 Insertion 4 FN1024-S Chr12 25895809 25895813 0 0 Deletion 4 LOC_Os12g41810 expressed protein FN1024-S Chr12 8546932 8546933 0 0 Deletion 1 FN1024-S Chr2 15445819 15445820 0 0 Deletion 1 LOC_Os02g26294 expressed protein FN1024-S Chr2 16653387 G-A 0 0 Single Base Substitution 0 INTRON HET FN1024-S Chr2 17992504 18258774 0 0 Inversion 266270 FN1024-S Chr2 19855033 19855034 0 0 Deletion 1 FN1024-S Chr2 27346941 27346957 0 0 Deletion 16 FN1024-S Chr2 27484520 27484575 0 0 Deletion 55 FN1024-S Chr2 3264962 3264965 0 0 Deletion 3 LOC_Os02g06530 armadillo/beta-catenin repeat family protein, putative, expressed FN1024-S Chr2 32743086 32743103 0 0 Deletion 17 FN1024-S Chr2 33868457 33868458 0 0 Deletion 1 FN1024-S Chr2 6795209 6795213 0 0 Deletion 4 FN1024-S Chr2 7352560 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr2 7954256 Chr1 15637541 0 Translocation 0 FN1024-S Chr3 12521450 12521450 0 0 Insertion 1 FN1024-S Chr3 1417094 1417094 0 0 Insertion 2 FN1024-S Chr3 14892586 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr3 1838424 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed FN1024-S Chr3 20076228 20076283 0 0 Deletion 55 FN1024-S Chr3 20786702 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr3 23030206 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr3 3327118 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr3 33477732 33477733 0 0 Deletion 1 FN1024-S Chr3 36091007 C-T 0 0 Single Base Substitution 0 INTRON HET FN1024-S Chr4 21585150 21585150 0 0 Insertion 2 FN1024-S Chr4 30540439 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr5 10063255 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr5 11407881 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr5 15804062 15804073 0 0 Deletion 11 FN1024-S Chr5 19695163 19695163 0 0 Insertion 1 FN1024-S Chr5 23579147 23579148 0 0 Deletion 1 FN1024-S Chr5 25744401 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1024-S Chr5 27188430 27188431 0 0 Deletion 1 LOC_Os05g47450 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 3089001 Chr2 16394858 0 Translocation 0 FN1024-S Chr5 3644599 3644679 0 0 Deletion 80 FN1024-S Chr5 7501555 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16630 thioredoxin domain-containing protein 9, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16640 DUF630/DUF632 domains containing protein, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16660 WD domain, G-beta repeat domain containing protein, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16664 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16670 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16700 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16710 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16740 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16750 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16760 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16780 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16800 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16810 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16824 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16840 hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16860 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16880 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16889 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16900 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16920 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16930 protein kinase domain containing protein, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16940 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16950 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16970 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16980 terpene synthase 8, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g16990 hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17010 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17020 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17060 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17070 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17080 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17090 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17110 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17170 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17180 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17190 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17200 transposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17210 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17220 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17230 conserved hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17240 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17250 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17280 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17290 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17300 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17310 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17330 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17340 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17350 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17380 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17390 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17400 retrotransposon, putative, centromere-specific FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17440 transposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17450 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17460 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17490 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17500 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17510 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17520 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17530 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17540 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17550 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17560 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17580 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17590 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17604 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17640 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17650 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17670 retrotransposon protein, putative, Ty1-copia subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17680 conserved hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17690 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17700 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17710 hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17720 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17730 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17740 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17750 retrotransposon protein, putative, Ty1-copia subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17760 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17790 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17800 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17810 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17820 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17830 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17849 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17860 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17870 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17880 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17890 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17900 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17920 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17930 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17940 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17950 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17970 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17980 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g17990 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18000 retrotransposon protein, putative, LINE subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18020 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18030 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18050 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18060 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18080 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18090 SHR5-receptor-like kinase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18120 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18130 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18140 retrotransposon, putative, centromere-specific FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18150 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18160 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18170 retrotransposon, putative, centromere-specific, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18180 retrotransposon, putative, centromere-specific, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18220 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18250 retrotransposon, putative, centromere-specific FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18260 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18270 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18274 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18280 kelch domain containing protein, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18294 SEC14 cytosolic factor family protein, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18310 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18320 transposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18350 retrotransposon, putative, centromere-specific, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18360 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18370 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18390 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18400 retrotransposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18410 retrotransposon protein, putative, Ty1-copia subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18419 retrotransposon, putative, centromere-specific FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18446 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18470 CRAL/TRIO domain containing protein, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18524 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18530 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18540 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18550 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18560 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18604 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18640 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18650 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18660 OsFBDUF24 - F-box and DUF domain containing protein, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18670 C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18680 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18690 retrotransposon protein, putative, Ty3-gypsy subclass FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18700 hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18720 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18730 generative cell specific-1, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18740 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18750 ribosomal protein L25, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18770 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18774 protein phosphatase 1 regulatory subunit 11, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18780 rpp14 family protein, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18790 formyl transferase, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18800 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18820 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18830 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18840 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18850 endoribonuclease Dicer, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18860 STIGL2 - Stigma-specific Stig1 family protein precursor, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18870 hypothetical protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18890 transposon protein, putative, unclassified FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18900 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18910 retrotransposon protein, putative, unclassified, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18940 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18950 pentatricopeptide, putative, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18960 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18970 expressed protein FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr5 9434001 11024000 0 0 Deletion 1590000 LOC_Os05g18990 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1024-S Chr6 20211010 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr6 25778143 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr6 26153097 26153097 0 0 Insertion 3 FN1024-S Chr6 28903701 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr6 7561931 7561931 0 0 Insertion 1 FN1024-S Chr7 11138938 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr7 18745419 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr7 19164358 19164365 0 0 Deletion 7 FN1024-S Chr7 19173644 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr7 3623670 3623678 0 0 Deletion 8 FN1024-S Chr8 1203764 1203765 0 0 Deletion 1 FN1024-S Chr8 15185447 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1024-S Chr8 2427433 2435528 0 0 Inversion 8095 LOC_Os08g04840 MYB family transcription factor, putative, expressed FN1024-S Chr8 24914152 24914177 0 0 Deletion 25 FN1024-S Chr8 8612390 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1024-S Chr9 13152221 13152233 0 0 Deletion 12 FN1024-S Chr9 15877958 15927800 0 0 Inversion 49842 LOC_Os09g26370 DUF581 domain containing protein, expressed FN1024-S Chr9 20287708 Chr6 22062273 0 Translocation 0