FN1031-S Chr1 10524216 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr1 10567945 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr1 10660038 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1031-S Chr1 15793169 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN1031-S Chr1 34208909 34208928 0 0 Deletion 19 FN1031-S Chr1 34919998 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr10 10778331 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr10 3169012 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr10 4200105 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr10 6649590 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr10 9036224 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1031-S Chr10 9900682 9900684 0 0 Deletion 2 FN1031-S Chr11 10282685 10282698 0 0 Deletion 13 LOC_Os11g18240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1031-S Chr11 10562486 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr11 1171411 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr11 12905866 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr11 13507536 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr11 13966353 13966360 0 0 Deletion 7 FN1031-S Chr11 18058099 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr11 21961800 21961800 0 0 Insertion 8 FN1031-S Chr11 25984742 25984747 0 0 Deletion 5 FN1031-S Chr11 27840964 Chr7 21053039 0 Translocation 0 FN1031-S Chr11 3519419 3519423 0 0 Deletion 4 LOC_Os11g07060 receptor protein kinase CLAVATA1 precursor, putative, expressed FN1031-S Chr11 4153371 4153376 0 0 Deletion 5 FN1031-S Chr12 11668465 G-A 0 0 Single Base Substitution 0 INTRON HET FN1031-S Chr12 1236506 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1031-S Chr12 16969469 T-C 0 0 Single Base Substitution 0 INTRON HET FN1031-S Chr12 21963112 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr12 22298802 22299492 0 0 Deletion 690 LOC_Os12g36440 expressed protein FN1031-S Chr12 22298838 Chr2 1271885 0 Translocation 0 LOC_Os12g36440 expressed protein FN1031-S Chr12 22299474 Chr2 1271880 0 Translocation 0 LOC_Os12g36440 expressed protein FN1031-S Chr12 9389702 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1031-S Chr2 12838851 12838852 0 0 Deletion 1 FN1031-S Chr2 29970496 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr2 30045958 30381787 0 0 Inversion 335829 LOC_Os02g49130 expressed protein FN1031-S Chr2 30045958 30381787 0 0 Inversion 335829 LOC_Os02g49700 homeobox associated leucine zipper, putative, expressed FN1031-S Chr2 30382001 30394000 0 0 Deletion 12000 LOC_Os02g49700 homeobox associated leucine zipper, putative, expressed FN1031-S Chr2 30382001 30394000 0 0 Deletion 12000 LOC_Os02g49710 RING finger protein, putative, expressed FN1031-S Chr2 30382001 30394000 0 0 Deletion 12000 LOC_Os02g49720 aldehyde dehydrogenase, putative, expressed FN1031-S Chr2 33737920 33737920 0 0 Insertion 1 FN1031-S Chr2 6579241 T-C 0 0 Single Base Substitution 0 INTRON HET FN1031-S Chr2 719842 719843 0 0 Deletion 1 FN1031-S Chr3 15015413 15015428 0 0 Deletion 15 FN1031-S Chr3 22811533 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1031-S Chr3 28501288 G-A 0 0 Single Base Substitution 0 INTRON HET FN1031-S Chr3 29805508 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr3 32893619 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr3 688287 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr3 690222 690223 0 0 Deletion 1 FN1031-S Chr3 7731848 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr3 9839413 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr4 1032517 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1031-S Chr4 16041983 16041987 0 0 Deletion 4 FN1031-S Chr4 21321545 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr4 27091154 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr4 31443242 31443242 0 0 Insertion 15 LOC_Os04g52810 no apical meristem protein, putative, expressed FN1031-S Chr4 35496158 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr5 20223139 20223140 0 0 Deletion 1 FN1031-S Chr5 26876380 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr5 3579783 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1031-S Chr5 9758195 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr6 10384740 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr6 10840338 10840347 0 0 Deletion 9 FN1031-S Chr6 1123050 1123054 0 0 Deletion 4 FN1031-S Chr6 1428342 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr6 22467073 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g37990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1031-S Chr6 28897523 28897523 0 0 Insertion 1 FN1031-S Chr6 29699152 Chr2 30393448 0 Translocation 0 LOC_Os02g49720 aldehyde dehydrogenase, putative, expressed FN1031-S Chr6 29699152 Chr2 30393448 0 Translocation 0 LOC_Os06g49000 expressed protein FN1031-S Chr6 29699894 Chr2 30361792 0 Translocation 0 LOC_Os06g49000 expressed protein FN1031-S Chr6 4315919 4315940 0 0 Deletion 21 LOC_Os06g08660 pentatricopeptide, putative, expressed FN1031-S Chr6 5166579 5166607 0 0 Deletion 28 FN1031-S Chr6 7562184 7562185 0 0 Deletion 1 FN1031-S Chr6 8943463 8944595 0 0 Deletion 1132 FN1031-S Chr7 17069001 17069001 0 0 Insertion 2 FN1031-S Chr7 18574577 18574579 0 0 Deletion 2 LOC_Os07g31350 expressed protein FN1031-S Chr7 18735941 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr7 18900203 18902916 0 0 Inversion 2713 LOC_Os07g31800 NB-ARC domain containing protein, expressed FN1031-S Chr7 19025978 19025978 0 0 Insertion 2 FN1031-S Chr8 1031828 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1031-S Chr8 17546062 Chr4 9601802 0 Translocation 0 FN1031-S Chr8 19319727 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr8 20535210 20535210 0 0 Insertion 1 LOC_Os08g33050 MYB family transcription factor, putative, expressed FN1031-S Chr8 23241390 23241390 0 0 Insertion 1 FN1031-S Chr8 27061567 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr8 27625588 27625590 0 0 Deletion 2 FN1031-S Chr8 37969 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN1031-S Chr8 6307654 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN1031-S Chr9 14092171 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1031-S Chr9 2717447 Chr7 24948333 0 Translocation 0 LOC_Os07g41610 retrotransposon protein, putative, Ty1-copia subclass FN1031-S Chr9 4107808 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1031-S Chr9 6207036 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g11190 hypothetical protein FN1031-S Chr9 8720776 G-T 0 0 Single Base Substitution 0 INTRON HOMO