FN1042-S Chr1 12065891 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr1 14747424 14747430 0 0 Deletion 6 FN1042-S Chr1 15304493 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g27420 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1042-S Chr1 18788652 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr1 19759768 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr1 2027345 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr1 23234977 23234987 0 0 Deletion 10 LOC_Os01g41030 ribosomal protein L25, putative, expressed FN1042-S Chr1 25371395 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr1 39822307 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1042-S Chr10 16062725 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr10 2334864 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr10 3069754 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr11 15355429 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr11 16119841 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1042-S Chr11 22570458 Chr9 14955477 0 Translocation 0 LOC_Os11g38050 phosphoesterase family protein, putative, expressed FN1042-S Chr11 22570463 Chr9 14954927 0 Translocation 0 LOC_Os11g38050 phosphoesterase family protein, putative, expressed FN1042-S Chr11 22570463 Chr9 18512309 0 Translocation 0 LOC_Os09g30411 UBX domain-containing protein, putative, expressed FN1042-S Chr11 22570463 Chr9 18512309 0 Translocation 0 LOC_Os11g38050 phosphoesterase family protein, putative, expressed FN1042-S Chr11 22940302 22940303 0 0 Deletion 1 FN1042-S Chr11 25702674 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr11 9920830 9920831 0 0 Deletion 1 FN1042-S Chr12 13397036 Chr9 16355281 0 Translocation 0 FN1042-S Chr12 14241212 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr2 10199560 T-A 0 0 Single Base Substitution 0 INTRON HET FN1042-S Chr2 13544544 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr2 15062622 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g25720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1042-S Chr2 20529326 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr2 24050699 T-A 0 0 Single Base Substitution 0 INTRON HET FN1042-S Chr2 24050700 T-A 0 0 Single Base Substitution 0 INTRON HET FN1042-S Chr2 30387239 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr2 30387240 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr2 35132292 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr2 6611548 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g12660 protein kinase domain containing protein, putative, expressed FN1042-S Chr3 16765578 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1042-S Chr3 17068788 17068795 0 0 Deletion 7 FN1042-S Chr3 1853005 1853007 0 0 Deletion 2 LOC_Os03g04050 protein kinase family protein, putative, expressed FN1042-S Chr3 21564262 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr4 14865764 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr4 15038053 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr4 19486841 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr4 20150305 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr4 24510717 24510718 0 0 Deletion 1 FN1042-S Chr4 25276931 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr4 25601874 G-T 0 0 Single Base Substitution 0 INTRON HET FN1042-S Chr4 26134122 26629335 0 0 Inversion 495213 LOC_Os04g44150 gibberellin 2-beta-dioxygenase 7, putative, expressed FN1042-S Chr4 26629337 28137132 0 0 Inversion 1507795 FN1042-S Chr4 4604840 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1042-S Chr5 20369899 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr5 23114199 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g39410 expressed protein FN1042-S Chr5 23208358 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN1042-S Chr5 7728016 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr6 14606073 14606090 0 0 Deletion 17 FN1042-S Chr6 2348079 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1042-S Chr6 23749819 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g39930 retrotransposon protein, putative, unclassified, expressed FN1042-S Chr6 3735538 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1042-S Chr6 3738806 T-A 0 0 Single Base Substitution 0 INTRON HET FN1042-S Chr6 7179726 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr7 11692327 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g20280 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1042-S Chr7 19022988 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr7 21582576 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr7 29219184 29325144 0 0 Inversion 105960 FN1042-S Chr7 29219199 29325148 0 0 Inversion 105949 FN1042-S Chr7 9228444 Chr2 25382656 0 Translocation 0 LOC_Os02g42200 transcription factor-related, putative, expressed FN1042-S Chr8 14543813 16806724 0 0 Inversion 2262911 LOC_Os08g24050 retrotransposon protein, putative, unclassified, expressed FN1042-S Chr8 14543813 16806724 0 0 Inversion 2262911 LOC_Os08g27570 retrotransposon protein, putative, unclassified, expressed FN1042-S Chr8 27928794 27928803 0 0 Deletion 9 FN1042-S Chr8 7795950 Chr4 16367948 0 Translocation 0 FN1042-S Chr8 9498456 Chr7 25287861 0 Translocation 0 LOC_Os07g42250 strictosidine synthase, putative, expressed FN1042-S Chr9 13754419 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1042-S Chr9 14643611 Chr7 2367381 0 Translocation 0 FN1042-S Chr9 14675430 14883585 0 0 Inversion 208155 LOC_Os09g24650 zinc finger, C3HC4 type, putative, expressed FN1042-S Chr9 14675476 14955479 0 0 Inversion 280003 LOC_Os09g24650 zinc finger, C3HC4 type, putative, expressed FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24924 transporter family protein, putative, expressed FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24940 expressed protein FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24954 double-stranded RNA binding motif containing protein, expressed FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24965 expressed protein FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24970 expressed protein FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24980 vesicle transport v-SNARE protein, putative, expressed FN1042-S Chr9 14884001 14931000 0 0 Deletion 47000 LOC_Os09g24990 CAF1 family ribonuclease containing protein, putative, expressed FN1042-S Chr9 14931387 16458441 0 0 Inversion 1527054 LOC_Os09g24990 CAF1 family ribonuclease containing protein, putative, expressed FN1042-S Chr9 14931387 16458441 0 0 Inversion 1527054 LOC_Os09g27050 HD domain containing protein, putative, expressed FN1042-S Chr9 14943001 14955000 0 0 Deletion 12000 LOC_Os09g25010 expressed protein FN1042-S Chr9 14954927 18511916 0 0 Inversion 3556989 LOC_Os09g30411 UBX domain-containing protein, putative, expressed FN1042-S Chr9 15293442 16458438 0 0 Inversion 1164996 LOC_Os09g27050 HD domain containing protein, putative, expressed FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26920 OsSub57 - Putative Subtilisin homologue, expressed FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26930 expressed protein FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26940 cytochrome P450, putative, expressed FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26950 cytochrome P450 monooxygenase CYP92A1, putative FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26960 cytochrome P450, putative, expressed FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26970 retrotransposon protein, putative, unclassified, expressed FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26980 cytochrome P450, putative, expressed FN1042-S Chr9 16356001 16416000 0 0 Deletion 60000 LOC_Os09g26999 keratin-associated protein 5-4, putative, expressed FN1042-S Chr9 16996960 G-A 0 0 Single Base Substitution 0 INTRON HET