FN1049-S Chr1 13119445 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr1 13119446 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr1 14651777 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26370 expressed protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26390 TKL_IRAK_DUF26-lh.1 - DUF26 kinases have homology to DUF26 containing loci, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26410 expressed protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26920 expressed protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26930 transposon protein, putative, unclassified, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26940 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26950 hypothetical protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26960 conserved hypothetical protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26970 expressed protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26980 transposon protein, putative, unclassified, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g26990 retrotransposon protein, putative, unclassified, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g27010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g27020 transposon protein, putative, unclassified, expressed FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g27030 hypothetical protein FN1049-S Chr1 14959001 15082000 0 0 Deletion 123000 LOC_Os01g27040 chromatin-remodeling complex ATPase chain, putative, expressed FN1049-S Chr1 16687835 G-T 0 0 Single Base Substitution 0 INTRON HET FN1049-S Chr1 17022091 17022106 0 0 Deletion 15 FN1049-S Chr1 18599392 18599400 0 0 Deletion 8 FN1049-S Chr1 19888757 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr1 341341 341347 0 0 Deletion 6 FN1049-S Chr1 3777225 3777229 0 0 Deletion 4 FN1049-S Chr10 13078331 13078332 0 0 Deletion 1 FN1049-S Chr10 1530622 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1049-S Chr10 22297271 G-C 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN1049-S Chr10 6112892 6112893 0 0 Deletion 1 FN1049-S Chr11 13220832 Chr6 7220589 0 Translocation 0 FN1049-S Chr11 14662527 A-T 0 0 Single Base Substitution 0 INTRON HET FN1049-S Chr11 17264519 C-T 0 0 Single Base Substitution 0 INTRON HET FN1049-S Chr11 26131216 26131217 0 0 Deletion 1 FN1049-S Chr11 7551094 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr11 991993 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1049-S Chr12 14401104 Chr7 16636629 0 Translocation 0 FN1049-S Chr12 21685899 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr12 9130182 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr2 11795839 G-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os02g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1049-S Chr2 14620690 14620714 0 0 Deletion 24 FN1049-S Chr2 27790555 C-T 0 0 Single Base Substitution 0 INTRON HET FN1049-S Chr3 15680036 15680044 0 0 Deletion 8 FN1049-S Chr3 58766 58766 0 0 Insertion 1 LOC_Os03g01080 retrotransposon protein, putative, unclassified, expressed FN1049-S Chr4 13203909 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN1049-S Chr4 1381967 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1049-S Chr4 14239764 14239802 0 0 Deletion 38 LOC_Os04g24790 OsMADS81 - MADS-box family gene with M-gamma type-box, expressed FN1049-S Chr4 19562893 19562893 0 0 Insertion 1 FN1049-S Chr4 23110685 23110686 0 0 Deletion 1 LOC_Os04g38880 dynein light chain type 1 domain containing protein, expressed FN1049-S Chr4 4446212 Chr2 13153398 0 Translocation 0 FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02850 retrotransposon protein, putative, unclassified, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02870 white-brown complex homolog protein, putative, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02880 splicing factor, arginine/serine-rich 7, putative, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02890 white-brown complex homolog protein 16, putative, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02900 expressed protein FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02920 expressed protein FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02940 calcium-transporting ATPase 2, endoplasmic reticulum-type, putative, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02950 retrotransposon protein, putative, unclassified, expressed FN1049-S Chr5 1028001 1098000 0 0 Deletion 70000 LOC_Os05g02960 retrotransposon protein, putative, unclassified, expressed FN1049-S Chr5 19313833 19313834 0 0 Deletion 1 FN1049-S Chr5 20125290 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr5 6155985 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr5 7379723 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g13320 C4-dicarboxylate transporter/malic acid transport protein, expressed FN1049-S Chr6 1398816 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g03610 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed FN1049-S Chr6 1398817 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g03610 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed FN1049-S Chr6 16601602 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr6 5575127 5575175 0 0 Deletion 48 FN1049-S Chr6 9416988 9416997 0 0 Deletion 9 FN1049-S Chr7 6952067 6952067 0 0 Insertion 1 LOC_Os07g12320 WD domain, G-beta repeat domain containing protein, expressed FN1049-S Chr7 8744323 Chr2 12241709 0 Translocation 0 FN1049-S Chr7 9668741 9668742 0 0 Deletion 1 FN1049-S Chr8 12278513 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1049-S Chr8 21521246 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1049-S Chr8 27454714 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr8 27914573 27914579 0 0 Deletion 6 FN1049-S Chr8 3456889 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1049-S Chr8 6176130 6176135 0 0 Deletion 5 FN1049-S Chr8 689714 689724 0 0 Deletion 10 FN1049-S Chr9 13580341 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g22510 expressed protein FN1049-S Chr9 2691258 2691262 0 0 Deletion 4 LOC_Os09g04995 expressed protein FN1049-S Chr9 3907642 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr9 6265881 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1049-S Chr9 9720392 9720396 0 0 Deletion 4