FN1056-S Chr1 23636973 23636991 0 0 Deletion 18 FN1056-S Chr10 21999179 21999181 0 0 Deletion 2 FN1056-S Chr10 6738803 6738983 0 0 Deletion 180 LOC_Os10g12130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1056-S Chr10 8283012 8283019 0 0 Deletion 7 FN1056-S Chr10 8605251 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1056-S Chr11 10919192 C-A 0 0 Single Base Substitution 0 INTRON HET FN1056-S Chr11 18865564 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr11 24230085 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr11 26777790 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr12 13443567 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr12 21956543 21956544 0 0 Deletion 1 LOC_Os12g35930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1056-S Chr12 25757408 25757409 0 0 Deletion 1 FN1056-S Chr2 14156754 14156762 0 0 Deletion 8 FN1056-S Chr2 14329863 14329879 0 0 Deletion 16 FN1056-S Chr2 15064120 T-A 0 0 Single Base Substitution 0 INTRON HET FN1056-S Chr2 17286857 17286861 0 0 Deletion 4 FN1056-S Chr2 19942980 19942988 0 0 Deletion 8 FN1056-S Chr2 20180432 20180435 0 0 Deletion 3 LOC_Os02g33850 elongation factor Tu family protein, putative, expressed FN1056-S Chr2 2069262 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1056-S Chr2 29292674 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr2 34197836 34513794 0 0 Inversion 315958 FN1056-S Chr2 34757723 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1056-S Chr2 6506183 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr3 21922227 21922244 0 0 Deletion 17 FN1056-S Chr3 25691770 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1056-S Chr3 6762215 6762217 0 0 Deletion 2 FN1056-S Chr4 1463004 G-A 0 0 Single Base Substitution 0 INTRON HET FN1056-S Chr4 15847379 15847381 0 0 Deletion 2 FN1056-S Chr4 20539640 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1056-S Chr4 20567302 20567314 0 0 Deletion 12 FN1056-S Chr4 34730832 34730832 0 0 Insertion 4 FN1056-S Chr5 20065180 20065283 0 0 Deletion 103 LOC_Os05g33980 retrotransposon protein, putative, unclassified, expressed FN1056-S Chr5 23680969 23680993 0 0 Deletion 24 FN1056-S Chr6 13781782 13781783 0 0 Deletion 1 FN1056-S Chr6 16101749 16101749 0 0 Insertion 2 FN1056-S Chr6 16334201 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr6 1924125 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42270 expressed protein FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42300 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42310 beta-galactosidase precursor, putative, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42320 expressed protein FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42330 expressed protein FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42340 hypothetical protein FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42360 retrotransposon protein, putative, unclassified, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42370 retrotransposon protein, putative, unclassified, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42380 retrotransposon protein, putative, unclassified, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42390 expressed protein FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42400 transposon protein, putative, unclassified, expressed FN1056-S Chr6 25383001 25493000 0 0 Deletion 110000 LOC_Os06g42410 expressed protein FN1056-S Chr6 31191438 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr7 11143768 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1056-S Chr7 11172830 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN1056-S Chr7 22737362 22737369 0 0 Deletion 7 FN1056-S Chr7 24599595 24599596 0 0 Deletion 1 FN1056-S Chr7 25700384 25700407 0 0 Deletion 23 FN1056-S Chr7 28951688 28951745 0 0 Deletion 57 FN1056-S Chr7 29109043 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr7 29109044 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr7 3677975 3677976 0 0 Deletion 1 FN1056-S Chr7 6962382 6962383 0 0 Deletion 1 FN1056-S Chr8 13484119 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr8 1834180 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1056-S Chr8 18789840 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr8 18803017 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1056-S Chr8 25051843 25051844 0 0 Deletion 1 FN1056-S Chr8 6880585 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr8 7231716 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1056-S Chr9 12979550 12979551 0 0 Deletion 1 FN1056-S Chr9 8715129 8715148 0 0 Deletion 19