FN1061-S Chr1 10553487 10553487 0 0 Insertion 1 FN1061-S Chr1 11392575 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr1 14625163 14625169 0 0 Deletion 6 LOC_Os01g25820 respiratory burst oxidase, putative, expressed FN1061-S Chr1 17673897 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr1 29977604 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr1 3360977 3360979 0 0 Deletion 2 LOC_Os01g07120 AP2 domain containing protein, expressed FN1061-S Chr1 34037764 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr10 1403901 1403911 0 0 Deletion 10 FN1061-S Chr10 15003017 Chr2 34496373 0 Translocation 0 LOC_Os02g56354 transposon protein, putative, unclassified, expressed FN1061-S Chr10 15487869 Chr3 9683528 0 Translocation 0 LOC_Os03g17410 expressed protein FN1061-S Chr10 15540088 Chr3 9681406 0 Translocation 0 LOC_Os03g17410 expressed protein FN1061-S Chr10 15540088 Chr3 9681406 0 Translocation 0 LOC_Os10g29920 snRNP protein, putative, expressed FN1061-S Chr10 6314510 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr10 7993742 7993744 0 0 Deletion 2 LOC_Os10g15310 expressed protein FN1061-S Chr10 8212879 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1061-S Chr11 11668510 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1061-S Chr11 20151331 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr11 20151338 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr11 22427572 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr11 3458495 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr11 8121485 11650696 0 0 Inversion 3529211 LOC_Os11g14460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr11 8121485 11650696 0 0 Inversion 3529211 LOC_Os11g20160 O-methyltransferase, putative, expressed FN1061-S Chr12 20688269 20688270 0 0 Deletion 1 FN1061-S Chr12 26732786 26732797 0 0 Deletion 11 FN1061-S Chr12 27296155 Chr8 3913716 0 Translocation 0 LOC_Os12g44000 ubiquitin-conjugating enzyme E2 W, putative, expressed FN1061-S Chr2 11795839 G-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os02g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr2 13184747 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr2 14758665 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr2 16929135 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr2 21352849 21352852 0 0 Deletion 3 FN1061-S Chr2 22546222 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr2 22593290 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr2 23269000 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1061-S Chr2 30329803 30329812 0 0 Deletion 9 FN1061-S Chr2 34708393 34708396 0 0 Deletion 3 FN1061-S Chr3 16397696 16397697 0 0 Deletion 1 LOC_Os03g28910 expressed protein FN1061-S Chr3 20266675 20266684 0 0 Deletion 9 FN1061-S Chr3 30507957 30507962 0 0 Deletion 5 LOC_Os03g53180 expressed protein FN1061-S Chr3 34491585 34678444 0 0 Inversion 186859 LOC_Os03g60670 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr3 4353086 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr4 3149355 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06260 transposon protein, putative, CACTA, En/Spm sub-class FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06270 hypothetical protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06280 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06290 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06300 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06310 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06320 retrotransposon, putative, centromere-specific, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06330 retrotransposon, putative, centromere-specific FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06340 MEGL11 - Maternally expressed gene MEG family protein precursor, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06350 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06374 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06380 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06388 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06390 retrotransposon protein, putative, Ty3-gypsy subclass FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06400 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06402 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06420 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06429 retrotransposon protein, putative, Ty3-gypsy subclass FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06440 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06460 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06480 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06490 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06500 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06510 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06520 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06530 MEGL12 - Maternally expressed gene MEG family protein precursor, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06540 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06550 retrotransposon, putative, centromere-specific, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06560 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06580 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06590 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06600 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06630 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06640 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06650 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06660 retrotransposon protein, putative, Ty3-gypsy subclass FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06670 retrotransposon protein, putative, unclassified FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06690 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06700 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06710 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06734 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06770 argonaute, putative, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06780 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06790 2-aminoethanethiol dioxygenase, putative, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06800 hypothetical protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06820 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06830 hypothetical protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06840 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06850 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06860 peroxidase 28 precursor, putative, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06870 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06879 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06900 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06910 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06920 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06940 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06950 conserved hypothetical protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06960 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06970 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06980 retrotransposon protein, putative, Ty3-gypsy subclass FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g06990 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07000 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07040 expressed protein FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr4 3246001 3747000 0 0 Deletion 501000 LOC_Os04g07080 retrotransposon protein, putative, unclassified FN1061-S Chr4 32556409 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr5 10955541 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr5 11907456 11907459 0 0 Deletion 3 FN1061-S Chr5 12124653 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1061-S Chr5 12938447 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr5 16305052 16305052 0 0 Insertion 1 FN1061-S Chr5 21676294 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr5 7226938 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr6 10897789 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr6 12449908 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr6 17448486 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr6 27257000 27257001 0 0 Deletion 1 FN1061-S Chr6 31140177 31140178 0 0 Deletion 1 FN1061-S Chr7 11006820 11006823 0 0 Deletion 3 FN1061-S Chr7 17311132 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr7 28110776 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr7 28551625 28551625 0 0 Insertion 1 FN1061-S Chr7 7352871 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr8 11837595 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr8 1433231 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr8 2357935 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g04730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1061-S Chr8 2372818 2950812 0 0 Inversion 577994 LOC_Os08g04760 retrotransposon protein, putative, unclassified, expressed FN1061-S Chr8 2372818 2950812 0 0 Inversion 577994 LOC_Os08g05520 myb-like DNA-binding domain containing protein, putative, expressed FN1061-S Chr8 4214358 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1061-S Chr9 1132698 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1061-S Chr9 13176624 13176649 0 0 Deletion 25 FN1061-S Chr9 15449497 15449513 0 0 Deletion 16 LOC_Os09g25770 auxin-induced protein 5NG4, putative, expressed FN1061-S Chr9 7033115 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO