FN1075-S Chr1 10093467 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g18040 retrotransposon protein, putative, unclassified, expressed FN1075-S Chr1 11559019 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr1 15838395 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g28270 retrotransposon protein, putative, Ty1-copia subclass FN1075-S Chr1 17386223 17386225 0 0 Deletion 2 FN1075-S Chr1 17952043 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33204 retrotransposon protein, putative, unclassified, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33220 retrotransposon protein, putative, unclassified, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33230 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33240 transposon protein, putative, unclassified, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33250 retrotransposon protein, putative, Ty3-gypsy subclass FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33260 retrotransposon protein, putative, unclassified, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33270 hypothetical protein FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33290 hypothetical protein FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33300 polygalacturonase, putative, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33324 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1075-S Chr1 18273001 18370000 0 0 Deletion 97000 LOC_Os01g33350 zinc-binding protein, putative, expressed FN1075-S Chr1 24352689 24352689 0 0 Insertion 1 FN1075-S Chr1 26561629 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr1 31977079 31977085 0 0 Deletion 6 FN1075-S Chr1 32444859 32444861 0 0 Deletion 2 FN1075-S Chr1 32893070 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr1 34312130 34312162 0 0 Deletion 32 FN1075-S Chr1 41117889 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g71050 MSP domain containing protein, putative, expressed FN1075-S Chr10 12604490 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1075-S Chr10 21486934 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN1075-S Chr10 22047190 22047195 0 0 Deletion 5 FN1075-S Chr10 4015204 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1075-S Chr10 5028307 5028314 0 0 Deletion 7 FN1075-S Chr10 6192772 6192822 0 0 Deletion 50 FN1075-S Chr11 10682245 A-T 0 0 Single Base Substitution 0 INTRON HET FN1075-S Chr11 17080461 17080462 0 0 Deletion 1 FN1075-S Chr11 20162928 20162932 0 0 Deletion 4 LOC_Os11g34410 retrotransposon protein, putative, unclassified, expressed FN1075-S Chr11 2667818 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr11 332935 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr11 5869009 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr11 6289689 6289712 0 0 Deletion 23 FN1075-S Chr12 18307813 18307832 0 0 Deletion 19 FN1075-S Chr12 19403926 19403926 0 0 Insertion 2 FN1075-S Chr12 3646191 3747092 0 0 Inversion 100901 LOC_Os12g07530 splicing factor, putative, expressed FN1075-S Chr12 692137 692137 0 0 Insertion 2 FN1075-S Chr12 9968414 9968415 0 0 Deletion 1 FN1075-S Chr2 11610628 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr2 20537786 G-A 0 0 Single Base Substitution 0 INTRON HET FN1075-S Chr2 20895932 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr2 22196076 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g36800 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1075-S Chr2 24501257 C-T 0 0 Single Base Substitution 0 INTRON HET FN1075-S Chr2 25007731 25007737 0 0 Deletion 6 LOC_Os02g41680 phenylalanine ammonia-lyase, putative, expressed FN1075-S Chr2 34022808 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr2 34586845 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr2 6000329 6000334 0 0 Deletion 5 FN1075-S Chr3 13108725 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g22690 nucleoporin interacting component, putative, expressed FN1075-S Chr3 17167438 17167438 0 0 Insertion 1 FN1075-S Chr3 20791469 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr3 28083227 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr3 30106230 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr3 5250028 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21660 AAA-type ATPase family protein, putative, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21670 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21680 transposon protein, putative, unclassified, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21690 retrotransposon protein, putative, unclassified, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21705 PB1 domain containing protein, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21710 expressed protein FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21720 N2, N2-dimethylguanosine tRNA methyltransferase, putative, expressed FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21730 XH domain containing protein FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21740 expressed protein FN1075-S Chr4 12255954 12311893 0 0 Deletion 55939 LOC_Os04g21750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1075-S Chr4 24906049 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr4 30672721 30672724 0 0 Deletion 3 FN1075-S Chr5 11752413 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28050 expressed protein FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28060 retrotransposon, putative, centromere-specific FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28070 retrotransposon, putative, centromere-specific, expressed FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28090 expressed protein FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28100 transposon protein, putative, Pong sub-class, expressed FN1075-S Chr5 16392001 16446000 0 0 Deletion 54000 LOC_Os05g28120 transposon protein, putative, unclassified, expressed FN1075-S Chr5 17289595 17289595 0 0 Insertion 4 FN1075-S Chr5 17768712 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr5 19963032 T-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1075-S Chr5 25828951 25828953 0 0 Deletion 2 FN1075-S Chr5 5190180 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g09290 expressed protein FN1075-S Chr5 8328982 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g14620 retrotransposon protein, putative, unclassified FN1075-S Chr5 9040212 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr6 10610156 T-A 0 0 Single Base Substitution 0 INTRON HET FN1075-S Chr6 16466740 16467090 0 0 Deletion 350 FN1075-S Chr6 16466770 Chr5 29370720 0 Translocation 0 LOC_Os05g51200 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1075-S Chr6 16467079 Chr5 29505342 0 Translocation 0 FN1075-S Chr6 17934547 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr6 21846001 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr6 26600582 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr6 30894083 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1075-S Chr6 30969048 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1075-S Chr6 6513001 6556000 0 0 Deletion 43000 LOC_Os06g12160 AAA-type ATPase family protein, putative, expressed FN1075-S Chr6 6513001 6556000 0 0 Deletion 43000 LOC_Os06g12170 expressed protein FN1075-S Chr6 6513001 6556000 0 0 Deletion 43000 LOC_Os06g12180 jacalin-like lectin domain containing protein, expressed FN1075-S Chr6 6513001 6556000 0 0 Deletion 43000 LOC_Os06g12190 glutaredoxin, putative, expressed FN1075-S Chr6 6513001 6556000 0 0 Deletion 43000 LOC_Os06g12200 hypothetical protein FN1075-S Chr6 994243 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr7 235830 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr7 26445279 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr7 8117095 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1075-S Chr7 8680791 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr8 11418342 11418343 0 0 Deletion 1 FN1075-S Chr8 1318622 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr8 16451361 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr8 1670622 1670631 0 0 Deletion 9 LOC_Os08g03570 NAD dependent epimerase/dehydratase family protein, putative, expressed FN1075-S Chr8 8303236 C-A 0 0 Single Base Substitution 0 INTRON HET FN1075-S Chr9 10010598 A-G 0 0 Single Base Substitution 0 INTRON HET FN1075-S Chr9 11688937 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1075-S Chr9 15810953 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1075-S Chr9 18098936 18098946 0 0 Deletion 10 LOC_Os09g29780 expressed protein FN1075-S Chr9 659188 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1075-S Chr9 854260 T-C 0 0 Single Base Substitution 0 INTERGENIC HET