FN1106-S Chr1 11768578 11768578 0 0 Insertion 2 FN1106-S Chr1 16398935 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr1 16498624 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1106-S Chr1 1760151 1760201 0 0 Deletion 50 LOC_Os01g04050 BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed FN1106-S Chr1 37349333 37349334 0 0 Deletion 1 FN1106-S Chr1 39306162 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g67620 expressed protein FN1106-S Chr1 42672111 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr1 5487189 A-G 0 0 Single Base Substitution 0 INTRON HET FN1106-S Chr1 6790348 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr1 6854248 6854264 0 0 Deletion 16 FN1106-S Chr10 12767145 12767153 0 0 Deletion 8 FN1106-S Chr10 13112597 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr10 13853879 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr10 14860182 G-A 0 0 Single Base Substitution 0 INTRON HET FN1106-S Chr10 2824553 2824553 0 0 Insertion 1 FN1106-S Chr10 6177454 6177458 0 0 Deletion 4 FN1106-S Chr10 7033472 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr11 14878371 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr11 15061272 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26300 transposon protein, putative, unclassified, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27810 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27840 retrotransposon protein, putative, Ty3-gypsy subclass FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27860 retrotransposon protein, putative, Ty3-gypsy subclass FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27880 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27890 retrotransposon protein, putative, Ty3-gypsy subclass FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27900 retrotransposon protein, putative, unclassified FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27930 hypothetical protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27940 expressed protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27970 glycine-rich cell wall structural protein 1 precursor, putative, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27980 lipase class 3 family protein, putative, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g27990 hypothetical protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28000 expressed protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28010 hypothetical protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28030 transposon protein, putative, CACTA, En/Spm sub-class FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28040 transposon protein, putative, CACTA, En/Spm sub-class FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28060 cytochrome P450, putative, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28065 cytochrome P450 71C1, putative, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28070 retrotransposon protein, putative, unclassified FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28080 expressed protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28104 TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28130 expressed protein FN1106-S Chr11 16010001 16175000 0 0 Deletion 165000 LOC_Os11g28140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28150 transposon protein, putative, CACTA, En/Spm sub-class FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28170 expressed protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28184 expressed protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28210 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28220 expressed protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28230 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28240 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28250 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28260 expressed protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28270 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28280 expressed protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28290 transposon protein, putative, Pong sub-class, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28300 uncharacterized protein family UPF0016 domain containing protein, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28310 P21-Rho-binding domain containing protein, putative, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28320 expressed protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28330 hypothetical protein FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28340 ER lumen protein retaining receptor, putative, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28350 CDK-activating kinase assembly factor MAT1 family protein, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28360 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28365 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed FN1106-S Chr11 16184001 16339000 0 0 Deletion 155000 LOC_Os11g28370 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1106-S Chr11 16590681 T-A 0 0 Single Base Substitution 0 INTRON HET FN1106-S Chr11 16591884 G-A 0 0 Single Base Substitution 0 INTRON HET FN1106-S Chr11 22336491 22336503 0 0 Deletion 12 FN1106-S Chr11 4120495 4120499 0 0 Deletion 4 FN1106-S Chr11 5151276 5151277 0 0 Deletion 1 FN1106-S Chr11 7583505 7583506 0 0 Deletion 1 FN1106-S Chr12 16656479 16656502 0 0 Deletion 23 FN1106-S Chr12 21373978 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr12 2362574 2362579 0 0 Deletion 5 FN1106-S Chr12 24252009 24252010 0 0 Deletion 1 LOC_Os12g39420 nucleobase-ascorbate transporter, putative, expressed FN1106-S Chr12 25110500 25110515 0 0 Deletion 15 FN1106-S Chr12 3948953 A-T 0 0 Single Base Substitution 0 INTRON HET FN1106-S Chr12 598591 598592 0 0 Deletion 1 FN1106-S Chr12 7367454 7367490 0 0 Deletion 36 FN1106-S Chr2 10096285 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr2 14482264 14482265 0 0 Deletion 1 FN1106-S Chr2 20237176 20237178 0 0 Deletion 2 FN1106-S Chr2 27647359 27647359 0 0 Insertion 2 FN1106-S Chr2 28272738 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g46400 expressed protein FN1106-S Chr2 3072007 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g06150 brassinosteroid LRR receptor kinase precursor, putative, expressed FN1106-S Chr2 31556392 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1106-S Chr2 32704061 32704063 0 0 Deletion 2 LOC_Os02g53450 expressed protein FN1106-S Chr2 6202615 6202630 0 0 Deletion 15 LOC_Os02g11960 ABC transporter, ATP-binding protein, putative, expressed FN1106-S Chr2 7381372 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr2 7381373 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr3 22610407 22610408 0 0 Deletion 1 FN1106-S Chr3 5357473 5357478 0 0 Deletion 5 FN1106-S Chr3 620220 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr3 7953706 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr3 9160725 9160726 0 0 Deletion 1 FN1106-S Chr4 10354834 10354835 0 0 Deletion 1 FN1106-S Chr4 12513454 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr4 15520723 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26600 expressed protein FN1106-S Chr4 19298058 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr4 24031659 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr4 3290752 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g06290 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr4 4803068 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1106-S Chr4 9075708 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g16680 fructose-1,6-bisphosphatase, putative, expressed FN1106-S Chr5 11175726 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1106-S Chr5 11548585 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g19820 retrotransposon protein, putative, unclassified FN1106-S Chr5 12411151 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr5 15037893 15037898 0 0 Deletion 5 LOC_Os05g25830 expressed protein FN1106-S Chr5 17609261 17609266 0 0 Deletion 5 FN1106-S Chr5 21825355 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g37300 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr5 27520478 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr5 6202387 6202387 0 0 Insertion 2 FN1106-S Chr5 8828461 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g15580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr6 14459991 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr6 15216255 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1106-S Chr6 17579168 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr6 17679383 17679387 0 0 Deletion 4 FN1106-S Chr6 20945408 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1106-S Chr7 15191665 15191676 0 0 Deletion 11 FN1106-S Chr7 24698522 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr7 26025339 26025345 0 0 Deletion 6 FN1106-S Chr7 26084330 26084359 0 0 Deletion 29 FN1106-S Chr7 27081901 A-C 0 0 Single Base Substitution 0 INTRON HET FN1106-S Chr7 6594323 6595972 0 0 Deletion 1649 FN1106-S Chr7 8658695 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr7 8801286 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr8 17705622 17705628 0 0 Deletion 6 FN1106-S Chr8 17711710 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1106-S Chr8 25505150 25505151 0 0 Deletion 1 FN1106-S Chr8 5657557 5657557 0 0 Insertion 4 FN1106-S Chr9 13367902 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1106-S Chr9 6302684 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14870 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14880 transposon protein, putative, Pong sub-class, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14890 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14900 retrotransposon protein, putative, unclassified FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14910 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14920 hypothetical protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14930 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14940 retrotransposon protein, putative, Ty1-copia subclass FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14950 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14960 transposon protein, putative, Pong sub-class, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14970 hypothetical protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g14990 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15000 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15010 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15020 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15030 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15040 hypothetical protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15044 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15050 ent-kaurene synthase A, chloroplast precursor, putative, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15060 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15070 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15100 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15140 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15150 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15160 retrotransposon protein, putative, unclassified FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15170 nucleobase-ascorbate transporter, putative, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15180 transposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15190 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15200 ankyrin repeat family protein, putative, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15210 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15220 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15230 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15240 carotenoid cleavage dioxygenase, putative, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15250 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15260 hypothetical protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15270 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15280 retrotransposon protein, putative, unclassified, expressed FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15284 expressed protein FN1106-S Chr9 8870001 9326000 0 0 Deletion 456000 LOC_Os09g15290 expressed protein