FN1124-S Chr1 13308981 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr1 1551778 1551778 0 0 Insertion 1 FN1124-S Chr1 17043865 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr1 17676109 17676112 0 0 Deletion 3 FN1124-S Chr1 20225304 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1124-S Chr1 25113728 25113730 0 0 Deletion 2 FN1124-S Chr1 3493027 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr1 36386565 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g62820 Transcription initiation factor TFIID subunit A containing protein, expressed FN1124-S Chr1 6280259 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1124-S Chr1 7301144 7397105 0 0 Inversion 95961 FN1124-S Chr1 7301169 7397110 0 0 Inversion 95941 FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01044 isoflavone reductase, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01060 protein kinase family protein, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01070 expressed protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01080 SOR/SNZ family protein, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01090 retrotransposon protein, putative, Ty3-gypsy subclass FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01100 receptor-like protein kinase, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01110 OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01120 retrotransposon protein, putative, Ty1-copia subclass FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01134 OsSCP46 - Putative Serine Carboxypeptidase homologue, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01150 hypothetical protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01164 retrotransposon protein, putative, unclassified FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01180 retrotransposon protein, putative, Ty3-gypsy subclass FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01200 retrotransposon protein, putative, Ty3-gypsy subclass FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01210 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01230 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01240 VQ domain containing protein, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01250 expressed protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01260 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01290 PHLOEM 2-LIKE A10, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01300 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01310 expressed protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01320 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01330 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01340 expressed protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01350 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01370 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01380 CW7, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01390 OsWAK93 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01400 hypothetical protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01410 OsWAK94 - OsWAK receptor-like protein OsWAK-RLP, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01420 hypothetical protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01430 expressed protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01440 retrotransposon protein, putative, Ty1-copia subclass FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01450 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01460 expressed protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01470 homeobox associated leucine zipper, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01480 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01490 hypothetical protein FN1124-S Chr10 55001 325000 0 0 Deletion 270000 LOC_Os10g01500 expressed protein FN1124-S Chr10 5990645 5990647 0 0 Deletion 2 FN1124-S Chr11 10691514 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr11 11101912 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr11 13091414 13091415 0 0 Deletion 1 FN1124-S Chr11 18597147 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g31720 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr11 20289955 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr11 23110694 23110703 0 0 Deletion 9 FN1124-S Chr11 27705912 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g45790 NB-ARC domain containing protein, expressed FN1124-S Chr11 5165402 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1124-S Chr12 12562005 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr12 1583162 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr12 1835714 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr2 1565670 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr2 16497120 G-A 0 0 Single Base Substitution 0 INTRON HET FN1124-S Chr2 19577666 19577669 0 0 Deletion 3 FN1124-S Chr2 24894725 24894725 0 0 Insertion 3 FN1124-S Chr2 27945741 27945764 0 0 Deletion 23 FN1124-S Chr2 5177504 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr2 8620687 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr3 11249633 11249646 0 0 Deletion 13 FN1124-S Chr3 18668882 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr3 4937660 4937671 0 0 Deletion 11 FN1124-S Chr3 9934563 C-T 0 0 Single Base Substitution 0 INTRON HET FN1124-S Chr4 2007049 C-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os04g04290 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr4 29365741 29365747 0 0 Deletion 6 FN1124-S Chr4 34590915 34611994 0 0 Deletion 21079 LOC_Os04g58080 polygalacturonase inhibitor 3 precursor, putative, expressed FN1124-S Chr4 34590915 34611994 0 0 Deletion 21079 LOC_Os04g58090 harpin-induced protein 1 domain containing protein, expressed FN1124-S Chr4 34590915 34611994 0 0 Deletion 21079 LOC_Os04g58100 expressed protein FN1124-S Chr4 34590915 34611994 0 0 Deletion 21079 LOC_Os04g58110 pyruvate kinase, putative, expressed FN1124-S Chr4 8089257 T-A 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN1124-S Chr5 10207440 10207450 0 0 Deletion 10 FN1124-S Chr5 16527997 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr5 2121768 Chr1 31762827 0 Translocation 0 LOC_Os01g55200 potassium channel KAT1, putative, expressed FN1124-S Chr5 2122717 Chr1 31762794 0 Translocation 0 LOC_Os01g55200 potassium channel KAT1, putative, expressed FN1124-S Chr5 22439261 22439271 0 0 Deletion 10 FN1124-S Chr5 27932748 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr5 28810461 28837949 0 0 Deletion 27488 LOC_Os05g50270 GATA zinc finger domain containing protein, expressed FN1124-S Chr5 28810461 28837949 0 0 Deletion 27488 LOC_Os05g50280 transporter family protein, putative, expressed FN1124-S Chr5 28810461 28837949 0 0 Deletion 27488 LOC_Os05g50290 hhH-GPD superfamily base excision DNA repair protein, putative, expressed FN1124-S Chr5 28810461 28837949 0 0 Deletion 27488 LOC_Os05g50300 AMP-binding enzyme, putative, expressed FN1124-S Chr5 28810461 28837949 0 0 Deletion 27488 LOC_Os05g50310 ZF-HD protein dimerisation region containing protein, expressed FN1124-S Chr5 28810461 28837949 0 0 Deletion 27488 LOC_Os05g50320 expressed protein FN1124-S Chr5 8159181 29294247 0 0 Inversion 21135066 LOC_Os05g51050 acyl-protein thioesterase, putative, expressed FN1124-S Chr5 8159841 29294234 0 0 Inversion 21134393 LOC_Os05g51050 acyl-protein thioesterase, putative, expressed FN1124-S Chr6 21958825 21958831 0 0 Deletion 6 FN1124-S Chr6 24599495 24599507 0 0 Deletion 12 FN1124-S Chr6 6394367 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr6 8491972 T-A 0 0 Single Base Substitution 0 INTRON HET FN1124-S Chr7 10416068 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1124-S Chr7 13088211 13088212 0 0 Deletion 1 LOC_Os07g23220 retrotransposon protein, putative, unclassified, expressed FN1124-S Chr7 7499018 7499018 0 0 Insertion 9 FN1124-S Chr8 161789 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr8 188810 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN1124-S Chr8 19837162 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1124-S Chr8 22002998 22003015 0 0 Deletion 17 FN1124-S Chr8 22362782 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g35490 ctr copper transporter family protein, putative, expressed FN1124-S Chr8 4102973 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr8 8314448 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr8 9295657 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1124-S Chr9 10828356 10828463 0 0 Deletion 107 FN1124-S Chr9 15545377 15545377 0 0 Insertion 2