FN1135-S Chr1 10954371 G-A 0 0 Single Base Substitution 0 INTRON HET FN1135-S Chr1 17464025 C-A 0 0 Single Base Substitution 0 INTRON HET FN1135-S Chr1 18185617 18185619 0 0 Deletion 2 FN1135-S Chr1 19016296 19044907 0 0 Deletion 28611 LOC_Os01g34490 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 19016296 19044907 0 0 Deletion 28611 LOC_Os01g34500 expressed protein FN1135-S Chr1 19016296 19044907 0 0 Deletion 28611 LOC_Os01g34510 hypothetical protein FN1135-S Chr1 19016296 19044907 0 0 Deletion 28611 LOC_Os01g34520 expressed protein FN1135-S Chr1 19016296 19044907 0 0 Deletion 28611 LOC_Os01g34530 transposon protein, putative, unclassified, expressed FN1135-S Chr1 20022648 20022650 0 0 Deletion 2 FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38040 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38058 retrotransposon protein, putative, unclassified FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38070 retrotransposon protein, putative, unclassified FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38090 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38100 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38110 cytochrome P450, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38120 plant protein of unknown function domain containing protein, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38130 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38140 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38150 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38160 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38170 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38180 peptidyl-prolyl isomerase, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38190 plant protein of unknown function domain containing protein, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38200 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38229 peptidyl-prolyl isomerase, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38244 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38270 retrotransposon protein, putative, Ty3-gypsy subclass FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38280 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38290 retrotransposon protein, putative, unclassified FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38300 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38310 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38320 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38340 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38359 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38380 plant protein of unknown function domain containing protein, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38390 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38430 plant protein of unknown function domain containing protein, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38440 transposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38450 hypothetical protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38460 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38480 GA18326-PA, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38490 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38500 DUF538 domain containing protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38510 protein transport protein Sec61 subunit beta, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38520 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38530 ELF3 protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38540 transposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38550 transposon protein, putative, unclassified, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38560 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38570 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38580 beta,beta-carotene 9,10-dioxygenase, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38590 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38600 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38610 helix-loop-helix DNA-binding domain containing protein, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38620 3-5 exonuclease/ nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38640 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38650 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38660 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38670 transporter family protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38680 transporter family protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38690 nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38700 nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38710 nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38720 nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38750 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38760 nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38780 nucleic acid binding protein, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38790 transposon protein, putative, CACTA, En/Spm sub-class FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38800 retrotransposon protein, putative, unclassified FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38820 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38830 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38840 TKL_IRAK_DUF26-le.1 - DUF26 kinases have homology to DUF26 containing loci, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38850 receptor-like serine-threonine protein kinase, putative, expressed FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38860 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38870 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38880 expressed protein FN1135-S Chr1 21314001 21825000 0 0 Deletion 511000 LOC_Os01g38890 expressed protein FN1135-S Chr1 29365632 29365637 0 0 Deletion 5 LOC_Os01g51120 vesicle transport v-SNARE protein, putative, expressed FN1135-S Chr1 37890259 38156305 0 0 Inversion 266046 LOC_Os01g65310 DUF803 domain containing, putative, expressed FN1135-S Chr1 37890259 38156305 0 0 Inversion 266046 LOC_Os01g65720 expressed protein FN1135-S Chr1 38558000 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1135-S Chr1 38558002 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g66379 expressed protein FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28830 expressed protein FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28840 speckle-type POZ protein, putative, expressed FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28850 retrotransposon protein, putative, unclassified FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28860 MBTB39 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28870 MBTB40 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28890 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28900 retrotransposon protein, putative, Ty3-gypsy subclass FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28910 retrotransposon protein, putative, unclassified FN1135-S Chr10 15027001 15072000 0 0 Deletion 45000 LOC_Os10g28914 expressed protein FN1135-S Chr10 15030310 16265459 0 0 Inversion 1235149 FN1135-S Chr10 16090738 16090739 0 0 Deletion 1 FN1135-S Chr10 17265405 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g32980 CESA7 - cellulose synthase, expressed FN1135-S Chr10 17883302 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr10 6778900 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr11 13799841 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr11 17308907 17308908 0 0 Deletion 1 FN1135-S Chr11 22630088 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1135-S Chr11 23050004 23050004 0 0 Insertion 2 FN1135-S Chr11 23816458 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1135-S Chr11 5673100 5673111 0 0 Deletion 11 FN1135-S Chr11 9917671 9917673 0 0 Deletion 2 LOC_Os11g17740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1135-S Chr11 9981774 G-A 0 0 Single Base Substitution 0 INTRON HET FN1135-S Chr12 1779535 1779569 0 0 Deletion 34 FN1135-S Chr12 20273258 20273258 0 0 Insertion 2 FN1135-S Chr12 23551114 23551114 0 0 Insertion 2 FN1135-S Chr12 3993644 C-T 0 0 Single Base Substitution 0 INTRON HET FN1135-S Chr12 8459840 8459842 0 0 Deletion 2 FN1135-S Chr2 12353499 12353499 0 0 Insertion 4 FN1135-S Chr2 19858325 19858326 0 0 Deletion 1 FN1135-S Chr2 30653835 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN1135-S Chr2 31455036 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1135-S Chr2 33673050 33673081 0 0 Deletion 31 FN1135-S Chr3 17541140 17541141 0 0 Deletion 1 FN1135-S Chr3 25580816 25580829 0 0 Deletion 13 FN1135-S Chr3 26689070 26689078 0 0 Deletion 8 FN1135-S Chr3 3676302 C-T 0 0 Single Base Substitution 0 INTRON HET FN1135-S Chr4 18959179 18959179 0 0 Insertion 2 FN1135-S Chr4 2009016 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g04290 retrotransposon protein, putative, unclassified, expressed FN1135-S Chr4 24132276 24132289 0 0 Deletion 13 FN1135-S Chr4 26251100 26251100 0 0 Insertion 1 LOC_Os04g44320 transposon protein, putative, unclassified, expressed FN1135-S Chr4 27753065 27753066 0 0 Deletion 1 FN1135-S Chr4 28962794 28962795 0 0 Deletion 1 FN1135-S Chr4 6944309 Chr1 37473759 0 Translocation 0 FN1135-S Chr4 6944318 Chr1 37472724 0 Translocation 0 LOC_Os01g64590 dof zinc finger domain containing protein, putative, expressed FN1135-S Chr5 6417555 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr6 12813952 12813972 0 0 Deletion 20 FN1135-S Chr6 15630732 15632324 0 0 Deletion 1592 LOC_Os06g27630 transposon protein, putative, unclassified FN1135-S Chr6 27010691 27010697 0 0 Deletion 6 FN1135-S Chr6 27095370 27095370 0 0 Insertion 1 FN1135-S Chr7 16388242 17687708 0 0 Inversion 1299466 LOC_Os07g30020 anthranilate phosphoribosyltransferase, putative, expressed FN1135-S Chr7 16388401 17687730 0 0 Inversion 1299329 LOC_Os07g30020 anthranilate phosphoribosyltransferase, putative, expressed FN1135-S Chr7 16718148 Chr1 21760272 0 Translocation 0 LOC_Os01g38780 nucleic acid binding protein, putative, expressed FN1135-S Chr7 16719969 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1135-S Chr7 16719970 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1135-S Chr7 17792809 Chr1 21760573 0 Translocation 0 LOC_Os01g38780 nucleic acid binding protein, putative, expressed FN1135-S Chr7 17792809 Chr1 21760573 0 Translocation 0 LOC_Os07g30150 phosphoribosyl transferase, putative, expressed FN1135-S Chr7 19026030 19026032 0 0 Deletion 2 FN1135-S Chr7 21930601 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr7 2508686 2508697 0 0 Deletion 11 FN1135-S Chr7 25370686 25370715 0 0 Deletion 29 FN1135-S Chr7 4030117 4030120 0 0 Deletion 3 LOC_Os07g07990 uncharacterized protein At4g06744 precursor, putative, expressed FN1135-S Chr7 7837106 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr8 19681060 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr8 20836443 20836445 0 0 Deletion 2 FN1135-S Chr8 23451578 23451587 0 0 Deletion 9 LOC_Os08g37115 expressed protein FN1135-S Chr9 11657418 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1135-S Chr9 11972150 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1135-S Chr9 3712680 Chr1 21825815 0 Translocation 0 LOC_Os01g38890 expressed protein FN1135-S Chr9 3712680 Chr1 21825815 0 Translocation 0 LOC_Os09g07430 retrotransposon, putative, centromere-specific, expressed FN1135-S Chr9 8233485 C-T 0 0 Single Base Substitution 0 INTERGENIC HET