FN1162-S Chr1 15511319 15511321 0 0 Deletion 2 FN1162-S Chr1 21857278 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr1 26815595 26815607 0 0 Deletion 12 FN1162-S Chr1 33222619 G-A 0 0 Single Base Substitution 0 INTRON HET FN1162-S Chr10 12926334 12926335 0 0 Deletion 1 FN1162-S Chr10 17314146 17314147 0 0 Deletion 1 LOC_Os10g33040 receptor-like protein kinase precursor, putative, expressed FN1162-S Chr10 1848954 1848981 0 0 Deletion 27 LOC_Os10g04040 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr10 539736 539760 0 0 Deletion 24 FN1162-S Chr10 6609686 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr10 7014804 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr10 758659 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr10 9051233 G-C 0 0 Single Base Substitution 0 INTRON HET FN1162-S Chr11 10733860 Chr2 32133705 0 Translocation 0 LOC_Os02g52510 SNF2 family N-terminal domain containing protein, expressed FN1162-S Chr11 10733860 Chr2 32133705 0 Translocation 0 LOC_Os11g18870 osFTL11 FT-Like11 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed FN1162-S Chr11 13664413 13664413 0 0 Insertion 1 FN1162-S Chr11 15585617 Chr2 32134540 0 Translocation 0 LOC_Os02g52510 SNF2 family N-terminal domain containing protein, expressed FN1162-S Chr11 15585617 Chr2 32134540 0 Translocation 0 LOC_Os11g27070 retrotransposon protein, putative, unclassified FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32500 rubredoxin family protein, putative, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32510 OsGH3-13 - Auxin-responsive GH3 gene family member, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32520 OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32530 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32540 chalcone synthase, putative, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32550 conserved hypothetical protein FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32560 expressed protein FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32570 expressed protein FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32580 chalcone synthase, putative, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32590 transposon protein, putative, Mariner sub-class, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32600 hypothetical protein FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32610 chalcone and stilbene synthases, putative, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32620 chalcone synthase, putative, expressed FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32630 expressed protein FN1162-S Chr11 19180001 19265000 0 0 Deletion 85000 LOC_Os11g32640 hypothetical protein FN1162-S Chr11 21306744 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr11 21864624 21864631 0 0 Deletion 7 FN1162-S Chr11 27017553 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g44680 calmodulin binding protein, putative, expressed FN1162-S Chr11 27187255 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr11 7969526 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1162-S Chr11 8298894 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g14720 expressed protein FN1162-S Chr12 14328200 14328206 0 0 Deletion 6 FN1162-S Chr12 22158148 22158149 0 0 Deletion 1 FN1162-S Chr12 25350034 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr2 11849995 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr2 16260378 G-A 0 0 Single Base Substitution 0 INTRON HET FN1162-S Chr2 1960987 1960996 0 0 Deletion 9 FN1162-S Chr2 35173125 A-T 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os02g57400 2-phosphoglycerate kinase-related, putative, expressed FN1162-S Chr2 35352647 35352651 0 0 Deletion 4 FN1162-S Chr2 4446610 4446611 0 0 Deletion 1 FN1162-S Chr2 8817832 8817841 0 0 Deletion 9 FN1162-S Chr3 10736416 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1162-S Chr3 1187642 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr3 16685350 16685352 0 0 Deletion 2 FN1162-S Chr3 23588649 23588650 0 0 Deletion 1 FN1162-S Chr3 28647563 28647571 0 0 Deletion 8 FN1162-S Chr3 34729816 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1162-S Chr3 36309216 36309216 0 0 Insertion 2 FN1162-S Chr4 20290460 20290461 0 0 Deletion 1 FN1162-S Chr4 29561386 29561393 0 0 Deletion 7 FN1162-S Chr4 30535984 30535987 0 0 Deletion 3 LOC_Os04g51540 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr4 4720237 4720242 0 0 Deletion 5 LOC_Os04g08690 expressed protein FN1162-S Chr5 25392827 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr5 25633456 C-T 0 0 Single Base Substitution 0 INTRON HET FN1162-S Chr6 1268401 1268409 0 0 Deletion 8 LOC_Os06g03320 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr6 13063112 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr6 13063113 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr6 16403693 16403700 0 0 Deletion 7 FN1162-S Chr6 21121132 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1162-S Chr6 23644970 23644970 0 0 Insertion 21 FN1162-S Chr6 8776654 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1162-S Chr7 10018475 10018476 0 0 Deletion 1 FN1162-S Chr7 10783516 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g18190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr7 27455936 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1162-S Chr7 27455940 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12100 expressed protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12110 eukaryotic translation initiation factor 3 subunit E, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12120 hypothetical protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12130 MYB family transcription factor, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12140 PPR repeat domain containing protein, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12150 acyl carrier protein, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12160 KHG/KDPG aldolase, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12170 ADP-ribosylation factor, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12180 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12190 retrotransposon protein, putative, unclassified FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12200 ADP-ribosylation factor, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12210 expressed protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12220 expressed protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12230 expressed protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12240 EF hand family protein, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12250 ribosomal protein L24, putative, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12255 expressed protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12260 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12270 retrotransposon protein, putative, unclassified, expressed FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12280 expressed protein FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12290 retrotransposon protein, putative, unclassified FN1162-S Chr7 6748001 6924000 0 0 Deletion 176000 LOC_Os07g12300 hypothetical protein FN1162-S Chr8 12066032 12089779 0 0 Deletion 23747 LOC_Os08g20130 flavonol sulfotransferase, putative, expressed FN1162-S Chr8 12066032 12089779 0 0 Deletion 23747 LOC_Os08g20140 retrotransposon protein, putative, unclassified FN1162-S Chr8 12066032 12089779 0 0 Deletion 23747 LOC_Os08g20150 retrotransposon protein, putative, unclassified FN1162-S Chr8 12066032 12089779 0 0 Deletion 23747 LOC_Os08g20160 SWIM zinc finger family protein, putative, expressed FN1162-S Chr8 12066032 12089779 0 0 Deletion 23747 LOC_Os08g20170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr8 12066037 15097680 0 0 Inversion 3031643 FN1162-S Chr8 12089776 15097671 0 0 Inversion 3007895 LOC_Os08g20170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr8 12821161 12821166 0 0 Deletion 5 FN1162-S Chr8 13415200 13431207 0 0 Deletion 16007 LOC_Os08g22260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr8 13415200 13431207 0 0 Deletion 16007 LOC_Os08g22270 retrotransposon protein, putative, Ty3-gypsy subclass FN1162-S Chr8 13415200 13431207 0 0 Deletion 16007 LOC_Os08g22284 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr8 16173469 16173475 0 0 Deletion 6 FN1162-S Chr9 10351887 Chr8 12156950 0 Translocation 0 FN1162-S Chr9 12153104 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr9 14001743 Chr8 13431244 0 Translocation 0 LOC_Os08g22284 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1162-S Chr9 14001743 Chr8 13431244 0 Translocation 0 LOC_Os09g23560 dehydrogenase, putative, expressed FN1162-S Chr9 15264604 15264605 0 0 Deletion 1 FN1162-S Chr9 16116029 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1162-S Chr9 21872978 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g37930 expressed protein