FN1190-S Chr1 19095241 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr1 19401515 21843892 0 0 Inversion 2442377 LOC_Os01g35050 early-responsive to dehydration protein-related, putative, expressed FN1190-S Chr1 19401515 21843892 0 0 Inversion 2442377 LOC_Os01g38900 TKL_IRAK_DUF26-le.2 - DUF26 kinases have homology to DUF26 containing loci, expressed FN1190-S Chr1 21709566 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr1 21709567 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr1 28881601 28881603 0 0 Deletion 2 LOC_Os01g50310 VIP1 protein, putative, expressed FN1190-S Chr1 29364110 29364111 0 0 Deletion 1 FN1190-S Chr1 41776204 41776205 0 0 Deletion 1 FN1190-S Chr1 7469998 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr10 17752166 G-T 0 0 Single Base Substitution 0 INTRON HET FN1190-S Chr10 18151795 18151800 0 0 Deletion 5 FN1190-S Chr10 3574721 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr11 25437102 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr11 530948 539368 0 0 Inversion 8420 FN1190-S Chr11 530960 1205773 0 0 Inversion 674813 LOC_Os11g03270 nucleoside-triphosphatase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02030 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02054 ACT domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02070 BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02080 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02090 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02100 peroxidase precursor, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02110 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02120 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02130 peroxidase precursor, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02140 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02150 saposin-like type B, region 1 family protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02159 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02165 LTPL57 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02180 dual specificity protein phosphatase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02190 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02200 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02210 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02220 retrotransposon protein, putative, SINE subclass FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02230 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02240 CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02250 zinc finger, C3HC4 type domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02260 zinc finger, C3HC4 type domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02270 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02280 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02290 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02300 CPuORF36 - conserved peptide uORF-containing transcript, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02305 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02310 pentatricopeptide, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02320 nucleotidyltransferase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02330 LTPL22 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02340 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02350 LTPL25 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02360 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02369 LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02379 LTPL6 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02389 protease inhibitor/seed storage/LTP family, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02400 LTPL8 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02410 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02424 LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02440 chalcone--flavonone isomerase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02450 elongation factor P, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02460 outer membrane protein, OMP85 family, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02464 vacuolar-sorting receptor precursor, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02470 WRKY52, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02480 WRKY46, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02490 transposon protein, putative, unclassified FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02500 hypothetical protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02510 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02520 WRKY104, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02530 WRKY40, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02540 WRKY50, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02550 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02570 esterase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02580 esterase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02590 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02600 OsMan08 - Endo-Beta-Mannanase, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02610 BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02620 BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02630 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02640 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02650 fringe-related protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02660 hydrolase, alpha/beta fold family domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02670 zinc finger, C3HC4 type domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02690 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02700 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02720 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02730 harpin-induced protein 1 domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02740 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02750 DUF567 domain containing protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02760 histidine triad family protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02770 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02774 histidine triad family protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02778 transposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02790 transposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02800 DUF567 domain containing protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02810 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02820 CRP10 - Cysteine-rich family protein precursor, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02830 protein kinase domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02840 protein kinase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02850 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02860 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02870 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02880 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02900 retrotransposon protein, putative, Ty3-gypsy subclass FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02920 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02930 retrotransposon protein, putative, unclassified FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02940 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02950 auxin efflux carrier component, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02964 FAR1 family protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02980 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g02990 conserved hypothetical protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03000 retrotransposon protein, putative, unclassified FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03020 retrotransposon protein, putative, Ty3-gypsy subclass FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03050 cytidylyltransferase domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03060 SNF7 domain containing protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03070 ATCHX, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03080 hypothetical protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03090 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03100 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03110 GRAS family transcription factor domain containing protein, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03120 hypothetical protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03130 E2F-related protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03140 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03150 retrotransposon protein, putative, SINE subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03160 glycosyl transferase, family 8, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03170 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03180 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03190 expressed protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03200 EMB2748, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03210 glutathione S-transferase, N-terminal domain containing protein FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03220 RNA binding protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03230 nucleoside-triphosphatase, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03240 MATE efflux family protein, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03260 ligA, putative, expressed FN1190-S Chr11 540001 1206000 0 0 Deletion 666000 LOC_Os11g03270 nucleoside-triphosphatase, putative, expressed FN1190-S Chr11 5941325 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr11 6460383 6460384 0 0 Deletion 1 FN1190-S Chr12 11650749 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g20030 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr12 13233323 13233340 0 0 Deletion 17 FN1190-S Chr12 15223532 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr2 12857534 12857539 0 0 Deletion 5 FN1190-S Chr2 14345632 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g24730 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr2 14811820 14811827 0 0 Deletion 7 FN1190-S Chr2 19745141 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr2 22255594 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr2 28074908 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g46070 transposon protein, putative, unclassified, expressed FN1190-S Chr2 35885397 35885399 0 0 Deletion 2 LOC_Os02g58730 ras-related protein, putative, expressed FN1190-S Chr2 5557544 5557546 0 0 Deletion 2 FN1190-S Chr2 659588 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr3 2629234 2629239 0 0 Deletion 5 FN1190-S Chr3 36121188 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN1190-S Chr4 13912052 13912052 0 0 Insertion 3 FN1190-S Chr4 18071945 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g30270 protein kinase domain containing protein, expressed FN1190-S Chr4 31844194 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1190-S Chr4 33445058 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1190-S Chr4 7301078 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1190-S Chr5 21123335 21123343 0 0 Deletion 8 FN1190-S Chr5 24010764 24010781 0 0 Deletion 17 FN1190-S Chr5 26825473 26825500 0 0 Deletion 27 FN1190-S Chr5 27022138 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr5 2900965 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1190-S Chr5 6514541 6514541 0 0 Insertion 1 FN1190-S Chr5 8610327 8610327 0 0 Insertion 1 FN1190-S Chr6 10650284 G-A 0 0 Single Base Substitution 0 INTRON HET FN1190-S Chr6 30770403 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g50850 expressed protein FN1190-S Chr6 5687541 5687548 0 0 Deletion 7 FN1190-S Chr6 6248225 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr6 6350872 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g11920 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN1190-S Chr6 6532043 6532048 0 0 Deletion 5 FN1190-S Chr7 22375945 22375948 0 0 Deletion 3 FN1190-S Chr7 26496646 26496662 0 0 Deletion 16 FN1190-S Chr7 29572152 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr8 10194980 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1190-S Chr8 10699285 10699292 0 0 Deletion 7 LOC_Os08g17470 retrotransposon protein, putative, unclassified, expressed FN1190-S Chr8 12294015 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g20486 transposon protein, putative, unclassified, expressed FN1190-S Chr8 19995140 19995141 0 0 Deletion 1 FN1190-S Chr8 22337643 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr8 27624684 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1190-S Chr8 27900836 C-T 0 0 Single Base Substitution 0 INTRON HET FN1190-S Chr8 28206687 28206708 0 0 Deletion 21 FN1190-S Chr9 16038415 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO