FN1222-S Chr1 11729999 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g21010 expressed protein FN1222-S Chr1 13772892 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr1 24147855 24147864 0 0 Deletion 9 FN1222-S Chr1 24873493 24873495 0 0 Deletion 2 FN1222-S Chr1 6608811 6608815 0 0 Deletion 4 FN1222-S Chr1 953327 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr10 13282262 13282263 0 0 Deletion 1 FN1222-S Chr10 17838567 17838567 0 0 Insertion 4 FN1222-S Chr10 20016392 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1222-S Chr10 21168309 21168311 0 0 Deletion 2 FN1222-S Chr10 8238878 8238889 0 0 Deletion 11 FN1222-S Chr11 12148860 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1222-S Chr11 16853855 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1222-S Chr11 17123999 17124004 0 0 Deletion 5 FN1222-S Chr11 27829340 27829340 0 0 Insertion 1 FN1222-S Chr11 4108543 C-T 0 0 Single Base Substitution 0 INTRON HET FN1222-S Chr11 4388881 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g08330 POLD1 - Putative DNA polymerase delta catalytic subunit, expressed FN1222-S Chr11 4399466 4399467 0 0 Deletion 1 FN1222-S Chr12 11182506 11190997 0 0 Deletion 8491 LOC_Os12g19290 AGC_AGC_other_NDRh_TRCd.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN1222-S Chr12 13232886 13232893 0 0 Deletion 7 FN1222-S Chr12 16250365 G-C 0 0 Single Base Substitution 0 INTRON HET FN1222-S Chr12 18024343 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr2 12808027 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr2 16112299 16112321 0 0 Deletion 22 LOC_Os02g27350 expressed protein FN1222-S Chr2 17295538 C-T 0 0 Single Base Substitution 0 INTRON HET FN1222-S Chr2 24235268 24235268 0 0 Insertion 11 FN1222-S Chr2 27548605 T-C 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os02g45320 OsFBX58 - F-box domain containing protein, expressed FN1222-S Chr2 29706893 29706893 0 0 Insertion 2 FN1222-S Chr2 3201154 3201158 0 0 Deletion 4 FN1222-S Chr3 15513406 15513417 0 0 Deletion 11 FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29250 SPX domain-containing protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29260 elongation factor protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29270 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29280 conserved hypothetical protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29310 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29330 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29340 domain of unknown function domain containing protein, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29350 von Willebrand factor type A domain containing protein, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29360 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29370 hypothetical protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29389 hypothetical protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29400 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29410 tyrosine protein kinase domain containing protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29420 hypothetical protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29430 retrotransposon protein, putative, unclassified FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29440 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29460 60S ribosomal protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29470 transcription initiation factor IID, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29480 nodulation-signaling pathway 1 protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29490 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29510 retrotransposon protein, putative, Ty3-gypsy subclass FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29520 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29540 ATP-dependent protease, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29550 retrotransposon protein, putative, LINE subclass FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29560 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29570 mps one binder kinase activator-like 1A, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29584 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29614 myb-like DNA-binding domain containing protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29630 ulp1 protease family protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29660 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29680 EARLY flowering protein, putative, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29690 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29710 hypothetical protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29730 expressed protein FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29740 LSM domain containing protein, expressed FN1222-S Chr3 16644001 16964000 0 0 Deletion 320000 LOC_Os03g29750 expressed protein FN1222-S Chr3 31080693 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr3 33857723 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr3 34352986 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr3 9492816 9492832 0 0 Deletion 16 FN1222-S Chr3 9926537 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr4 12127260 12127262 0 0 Deletion 2 LOC_Os04g21450 retrotransposon, putative, centromere-specific FN1222-S Chr4 12494931 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26230 pollen allergen, putative, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26240 OsFBDUF21 - F-box and DUF domain containing protein, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26250 retrotransposon protein, putative, LINE subclass, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26260 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26270 hypothetical protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26280 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26300 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26310 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26320 mannose-binding lectin, putative, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26330 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26340 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26350 Leucine Rich Repeat family protein, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26360 transposon protein, putative, CACTA, En/Spm sub-class FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26370 retrotransposon protein, putative, Ty3-gypsy subclass FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26380 aspartic proteinase-like protein 2 precursor, putative, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26400 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26410 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26440 hypothetical protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26450 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26460 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26470 hypothetical protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26480 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26490 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26510 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26520 hypothetical protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26530 retrotransposon protein, putative, LINE subclass, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26540 retrotransposon protein, putative, unclassified FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26550 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26560 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26570 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26580 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26590 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26600 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26620 expressed protein FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26630 retrotransposon, putative, centromere-specific, expressed FN1222-S Chr4 15293001 15550000 0 0 Deletion 257000 LOC_Os04g26640 retrotransposon, putative, centromere-specific FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26750 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26790 eukaryotic aspartyl protease domain containing protein, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26810 hypothetical protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26820 hypothetical protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26834 eukaryotic aspartyl protease domain containing protein, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26841 importin-8, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26850 SAD2, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26870 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26880 transposon protein, putative, unclassified, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26890 IN2-2 protein, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26910 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26920 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26930 expressed protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26940 retrotransposon protein, putative, unclassified FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26950 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26960 terpene synthase, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26970 retrotransposon protein, putative, unclassified FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26980 terpene synthase, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g26994 retrotransposon protein, putative, unclassified FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27010 hypothetical protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27020 cytochrome P450, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27034 retrotransposon protein, putative, unclassified FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27050 expressed protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27060 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27070 terpene synthase, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27080 hypothetical protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27090 expressed protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27092 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27094 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27096 expressed protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27160 retrotransposon protein, putative, Ty3-gypsy subclass FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27170 retrotransposon protein, putative, Ty3-gypsy subclass FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27180 expressed protein FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27190 terpene synthase, putative, expressed FN1222-S Chr4 15628001 16074000 0 0 Deletion 446000 LOC_Os04g27200 expressed protein FN1222-S Chr4 25353917 25353917 0 0 Insertion 1 LOC_Os04g42840 HEAT repeat family protein, putative, expressed FN1222-S Chr5 13445929 Chr4 15938573 0 Translocation 0 LOC_Os05g23500 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr5 13864041 13864048 0 0 Deletion 7 FN1222-S Chr5 16365391 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr5 4299332 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr6 113635 113649 0 0 Deletion 14 FN1222-S Chr6 12672722 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1222-S Chr6 15071260 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr6 15071261 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr6 15744991 15744992 0 0 Deletion 1 FN1222-S Chr6 17652576 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1222-S Chr6 22821447 22821459 0 0 Deletion 12 LOC_Os06g38510 pectate lyase precursor, putative, expressed FN1222-S Chr6 5232124 5232124 0 0 Insertion 1 FN1222-S Chr6 7055864 7055865 0 0 Deletion 1 LOC_Os06g12882 S phase cyclin A-associated protein in the ER, putative, expressed FN1222-S Chr6 8113624 8113757 0 0 Deletion 133 FN1222-S Chr6 8365879 8365882 0 0 Deletion 3 FN1222-S Chr7 14332266 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1222-S Chr8 17818068 17818069 0 0 Deletion 1 FN1222-S Chr8 18110407 18110412 0 0 Deletion 5 FN1222-S Chr8 19871555 19871573 0 0 Deletion 18 LOC_Os08g32050 retrotransposon protein, putative, unclassified, expressed FN1222-S Chr8 7040061 7040066 0 0 Deletion 5 FN1222-S Chr9 10473083 10473084 0 0 Deletion 1 FN1222-S Chr9 13805119 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN1222-S Chr9 20463537 20463539 0 0 Deletion 2 FN1222-S Chr9 2516780 2516788 0 0 Deletion 8 LOC_Os09g04730 dehydrogenase/reductase SDR family member 2, putative, expressed FN1222-S Chr9 2535323 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr9 3019723 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr9 4140642 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1222-S Chr9 7847293 C-T 0 0 Single Base Substitution 0 INTERGENIC HET