FN1227-S Chr1 15873160 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr1 186967 186973 0 0 Deletion 6 FN1227-S Chr1 25474794 25474794 0 0 Insertion 1 FN1227-S Chr1 2549378 2549378 0 0 Insertion 22 FN1227-S Chr1 27064524 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr1 29493753 29494009 0 0 Deletion 256 FN1227-S Chr1 338922 338926 0 0 Deletion 4 FN1227-S Chr1 506020 506025 0 0 Deletion 5 LOC_Os01g01920 HD domain containing protein 2, putative, expressed FN1227-S Chr10 12127743 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr10 13101687 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr10 17576219 17576221 0 0 Deletion 2 FN1227-S Chr10 18069056 18069057 0 0 Deletion 1 FN1227-S Chr10 20102496 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr10 22812170 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr10 6211157 A-G 0 0 Single Base Substitution 0 INTRON HET FN1227-S Chr10 82899 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr10 90655 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr11 10293464 G-A 0 0 Single Base Substitution 0 INTRON HET FN1227-S Chr11 11679980 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g20220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr11 12728550 12728558 0 0 Deletion 8 FN1227-S Chr11 16034828 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr11 25797530 25797530 0 0 Insertion 1 FN1227-S Chr11 8257313 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g14650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr11 8672349 8672352 0 0 Deletion 3 FN1227-S Chr12 13220302 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g23360 retrotransposon protein, putative, unclassified FN1227-S Chr12 1350689 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr12 1350694 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr12 17338389 17338393 0 0 Deletion 4 FN1227-S Chr12 17353260 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr12 24893664 24952412 0 0 Inversion 58748 FN1227-S Chr12 26015292 26015293 0 0 Deletion 1 FN1227-S Chr12 4425387 4425394 0 0 Deletion 7 FN1227-S Chr2 24209244 24209244 0 0 Insertion 1 FN1227-S Chr2 26795988 26795988 0 0 Insertion 1 FN1227-S Chr3 12773949 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr3 25648583 25649172 0 0 Deletion 589 LOC_Os03g45440 expressed protein FN1227-S Chr3 25649125 Chr2 6043437 0 Translocation 0 LOC_Os02g11730 transposon protein, putative, unclassified, expressed FN1227-S Chr3 25649125 Chr2 6043437 0 Translocation 0 LOC_Os03g45440 expressed protein FN1227-S Chr3 26017376 26017381 0 0 Deletion 5 FN1227-S Chr3 7620255 7620255 0 0 Insertion 2 FN1227-S Chr4 10363423 A-C 0 0 Single Base Substitution 0 INTRON HET FN1227-S Chr4 15076645 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr4 21689251 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr4 2301652 2301652 0 0 Insertion 2 FN1227-S Chr4 3021364 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr5 12968172 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g22850 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13946854 14963285 0 0 Inversion 1016431 LOC_Os05g25720 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24170 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24180 retrotransposon, putative, centromere-specific FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24190 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24200 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24210 expressed protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24220 retrotransposon protein, putative, Ty1-copia subclass FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24230 hypothetical protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24240 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24260 expressed protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24270 PPR repeat domain containing protein, putative, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24280 expressed protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24340 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24370 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24380 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24390 hypothetical protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24410 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24420 retrotransposon, putative, centromere-specific, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24430 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24440 retrotransposon protein, putative, unclassified FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24450 hypothetical protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24460 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24470 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24480 expressed protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24490 expressed protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24500 terpene synthase, N-terminal domain containing protein, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24510 expressed protein FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 13947001 14153000 0 0 Deletion 206000 LOC_Os05g24530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 14153059 14963288 0 0 Inversion 810229 LOC_Os05g24530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 14153059 14963288 0 0 Inversion 810229 LOC_Os05g25720 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 14965592 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr5 14965593 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr5 16287221 16287222 0 0 Deletion 1 FN1227-S Chr5 25916561 25916570 0 0 Deletion 9 FN1227-S Chr5 26394143 26394147 0 0 Deletion 4 FN1227-S Chr5 26904105 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1227-S Chr5 8717667 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16100 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16110 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16120 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16130 transposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16140 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16160 malonyl-CoA isoflavone 7-O-glucoside-6-O-malonyltransferase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16170 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16180 NB-ARC domain containing protein, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16200 blight resistance protein T118, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16210 glycine-rich protein, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16220 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16230 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16240 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16250 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16280 transposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16290 transposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16300 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16315 translation initiation factor IF-2, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16320 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16330 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16340 transposon protein, putative, CACTA, En/Spm sub-class FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16360 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16370 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16380 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16395 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16400 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16410 retrotransposon, putative, centromere-specific, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16420 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16430 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16440 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16450 hypothetical protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16460 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16470 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16480 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16490 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16500 transposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16510 retrotransposon, putative, centromere-specific FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16520 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16530 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16540 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16550 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16560 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16570 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16580 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16600 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16610 transposon protein, putative, CACTA, En/Spm sub-class FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16620 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16630 thioredoxin domain-containing protein 9, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16640 DUF630/DUF632 domains containing protein, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16660 WD domain, G-beta repeat domain containing protein, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16664 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16670 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16700 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16710 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16740 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16750 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16760 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16780 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16800 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16810 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16824 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16840 hypothetical protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16860 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16880 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16889 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16900 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16920 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16930 protein kinase domain containing protein, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16940 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16950 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16970 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16980 terpene synthase 8, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g16990 hypothetical protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17010 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17020 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17060 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17070 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17080 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17090 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17110 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17170 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17180 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17190 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17200 transposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17210 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17220 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17230 conserved hypothetical protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17240 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17250 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17280 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17290 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17300 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17310 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17330 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17340 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17350 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17380 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17390 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17400 retrotransposon, putative, centromere-specific FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17440 transposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17450 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17460 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17490 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17500 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17510 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17520 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17530 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17540 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17550 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17560 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17580 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17590 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17604 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17640 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17650 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17670 retrotransposon protein, putative, Ty1-copia subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17680 conserved hypothetical protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17690 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17700 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17710 hypothetical protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17720 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17730 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17740 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17750 retrotransposon protein, putative, Ty1-copia subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17760 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17790 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17800 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17810 SHR5-receptor-like kinase, putative, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17820 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17830 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17849 expressed protein FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17860 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17870 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17880 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17890 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17900 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17920 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17930 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17940 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17950 retrotransposon protein, putative, unclassified FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17970 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17980 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr5 9096861 10344050 0 0 Deletion 1247189 LOC_Os05g17990 expressed protein FN1227-S Chr6 12203800 12203801 0 0 Deletion 1 FN1227-S Chr6 12263672 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr6 1321357 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g03450 retrotransposon protein, putative, Ty3-gypsy subclass FN1227-S Chr6 16038474 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr6 16238779 16238786 0 0 Deletion 7 FN1227-S Chr6 25917019 25917020 0 0 Deletion 1 FN1227-S Chr6 29717888 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr6 7163284 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1227-S Chr7 22856981 22856982 0 0 Deletion 1 FN1227-S Chr7 23803932 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr7 25476972 25476975 0 0 Deletion 3 FN1227-S Chr7 27162943 27162974 0 0 Deletion 31 LOC_Os07g45530 retrotransposon protein, putative, unclassified, expressed FN1227-S Chr7 28887714 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1227-S Chr7 29181488 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1227-S Chr8 11237246 11237247 0 0 Deletion 1 FN1227-S Chr8 16766788 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1227-S Chr8 17049350 17049357 0 0 Deletion 7 LOC_Os08g27980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1227-S Chr8 17459060 17938751 0 0 Inversion 479691 FN1227-S Chr8 17460443 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g28590 transposon protein, putative, CACTA, En/Spm sub-class FN1227-S Chr8 18562690 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g30200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1227-S Chr9 17779579 17779589 0 0 Deletion 10 FN1227-S Chr9 18160538 18173675 0 0 Deletion 13137 LOC_Os09g29870 expressed protein FN1227-S Chr9 18160538 18173675 0 0 Deletion 13137 LOC_Os09g29880 expressed protein FN1227-S Chr9 8836778 8836783 0 0 Deletion 5 FN1227-S Chr9 9061510 9061511 0 0 Deletion 1