FN1228-S Chr1 10951576 10951602 0 0 Deletion 26 FN1228-S Chr1 11547217 11547222 0 0 Deletion 5 FN1228-S Chr1 12166990 12166990 0 0 Insertion 13 FN1228-S Chr1 12269615 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr1 16467630 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr1 17049254 17049255 0 0 Deletion 1 FN1228-S Chr1 19504665 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr1 25177474 25177483 0 0 Deletion 9 FN1228-S Chr1 25555339 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g45030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1228-S Chr1 4807434 4807434 0 0 Insertion 2 FN1228-S Chr1 5745430 5745431 0 0 Deletion 1 FN1228-S Chr1 6410089 6410089 0 0 Insertion 1 FN1228-S Chr1 981531 981532 0 0 Deletion 1 FN1228-S Chr10 12321439 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24050 ribosome inactivating protein, putative, expressed FN1228-S Chr10 17531854 17531873 0 0 Deletion 19 FN1228-S Chr10 18628274 Chr5 9638214 0 Translocation 0 FN1228-S Chr10 18991902 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr11 14036819 14036849 0 0 Deletion 30 FN1228-S Chr11 17351757 17351758 0 0 Deletion 1 FN1228-S Chr11 190241 194015 0 0 Deletion 3774 FN1228-S Chr11 26129615 26129615 0 0 Insertion 2 FN1228-S Chr11 6023213 6023225 0 0 Deletion 12 FN1228-S Chr11 6196366 6196385 0 0 Deletion 19 FN1228-S Chr11 6198150 6198462 0 0 Deletion 312 FN1228-S Chr12 12234861 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr12 14422711 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr12 15527916 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26560 retrotransposon protein, putative, unclassified, expressed FN1228-S Chr12 17054932 17771111 0 0 Inversion 716179 LOC_Os12g28850 retrotransposon protein, putative, unclassified, expressed FN1228-S Chr12 7417691 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr2 12079171 12079172 0 0 Deletion 1 FN1228-S Chr2 12496415 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr2 19813461 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr2 20692348 20692357 0 0 Deletion 9 FN1228-S Chr2 26676160 26676161 0 0 Deletion 1 FN1228-S Chr2 4948860 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr2 5540414 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr3 15142298 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr3 1677588 1677599 0 0 Deletion 11 FN1228-S Chr3 24374368 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1228-S Chr3 29385404 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr3 29385413 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr3 34617107 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr3 35510681 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr3 3568420 3568423 0 0 Deletion 3 FN1228-S Chr3 6506541 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr4 10513146 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr4 24669500 24721362 0 0 Inversion 51862 LOC_Os04g41580 glycine-rich protein, putative, expressed FN1228-S Chr4 24669500 24721362 0 0 Inversion 51862 LOC_Os04g41700 expressed protein FN1228-S Chr4 29051598 29051602 0 0 Deletion 4 FN1228-S Chr4 34904945 A-T 0 0 Single Base Substitution 0 INTRON HET FN1228-S Chr4 4335314 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr4 7371255 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr5 14171272 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1228-S Chr5 21656615 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr5 25937118 C-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1228-S Chr5 29053641 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr5 8664270 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr5 9515308 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr6 23171396 23171429 0 0 Deletion 33 FN1228-S Chr6 23862373 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr6 23862817 23862820 0 0 Deletion 3 FN1228-S Chr6 5820501 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1228-S Chr7 17293881 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr7 17587815 17740088 0 0 Inversion 152273 LOC_Os07g29880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1228-S Chr7 18746220 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr7 18750503 18750505 0 0 Deletion 2 FN1228-S Chr7 19282875 19282881 0 0 Deletion 6 FN1228-S Chr7 20217898 20217901 0 0 Deletion 3 LOC_Os07g33780 pleiotropic drug resistance protein 5, putative, expressed FN1228-S Chr7 22657806 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr7 23995263 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr7 24982855 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr7 28173836 28173836 0 0 Insertion 1 FN1228-S Chr7 4701743 4701767 0 0 Deletion 24 FN1228-S Chr7 4729755 5772195 0 0 Inversion 1042440 LOC_Os07g09050 exostosin family protein, putative, expressed FN1228-S Chr8 16435701 17326152 0 0 Inversion 890451 FN1228-S Chr8 17333232 18002830 0 0 Inversion 669598 FN1228-S Chr8 25024480 25024484 0 0 Deletion 4 LOC_Os08g39560 OTU-like cysteine protease family protein, putative, expressed FN1228-S Chr8 6940085 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1228-S Chr9 10498201 10498210 0 0 Deletion 9 FN1228-S Chr9 21141851 21141853 0 0 Deletion 2 FN1228-S Chr9 4349164 4349165 0 0 Deletion 1 FN1228-S Chr9 5366721 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr9 9307587 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1228-S Chr9 9460332 9460335 0 0 Deletion 3 LOC_Os09g15460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed