FN1229-S Chr1 10098199 10098202 0 0 Deletion 3 FN1229-S Chr1 11747225 11747226 0 0 Deletion 1 FN1229-S Chr1 31489786 31489786 0 0 Insertion 1 FN1229-S Chr1 40699469 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1229-S Chr10 10009259 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr10 11580977 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr10 12472954 15045219 0 0 Inversion 2572265 LOC_Os10g28860 MBTB39 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1229-S Chr10 14812865 14812867 0 0 Deletion 2 LOC_Os10g28470 retrotransposon protein, putative, unclassified, expressed FN1229-S Chr11 12899369 12899380 0 0 Deletion 11 FN1229-S Chr11 14303960 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr11 18487015 18487030 0 0 Deletion 15 LOC_Os11g31620 OsFBL55 - F-box domain and LRR containing protein, expressed FN1229-S Chr11 22454602 22454606 0 0 Deletion 4 LOC_Os11g37880 stripe rust resistance protein Yr10, putative, expressed FN1229-S Chr12 12991680 12991744 0 0 Deletion 64 LOC_Os12g22980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1229-S Chr12 13083676 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1229-S Chr12 13326346 13326347 0 0 Deletion 1 LOC_Os12g23540 retrotransposon protein, putative, unclassified, expressed FN1229-S Chr12 17178263 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr12 22502655 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr12 22502658 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr12 22765441 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g37140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1229-S Chr12 25180483 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g40670 retrotransposon protein, putative, unclassified, expressed FN1229-S Chr12 26465567 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr12 26465568 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr12 4618841 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1229-S Chr12 5448730 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1229-S Chr2 16075710 16509962 0 0 Inversion 434252 LOC_Os02g27890 retrotransposon, putative, centromere-specific, expressed FN1229-S Chr2 16075723 16509977 0 0 Inversion 434254 LOC_Os02g27890 retrotransposon, putative, centromere-specific, expressed FN1229-S Chr2 1971014 1972409 0 0 Deletion 1395 LOC_Os02g04450 plant-specific domain TIGR01589 family protein, putative, expressed FN1229-S Chr2 19994897 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr2 3614281 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr3 24300436 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr4 27094906 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g45780 retrotransposon protein, putative, unclassified, expressed FN1229-S Chr4 30433565 30433569 0 0 Deletion 4 FN1229-S Chr4 35498128 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr4 5033893 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1229-S Chr4 6285600 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1229-S Chr4 7233531 7233541 0 0 Deletion 10 LOC_Os04g13110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1229-S Chr5 15390458 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1229-S Chr5 4178773 4178775 0 0 Deletion 2 LOC_Os05g07750 expressed protein FN1229-S Chr5 8247562 8247563 0 0 Deletion 1 FN1229-S Chr5 9014962 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1229-S Chr6 16506111 16506112 0 0 Deletion 1 FN1229-S Chr6 24316002 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g40780 MONOCULM 1, putative, expressed FN1229-S Chr7 12685468 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr7 13489243 T-C 0 0 Single Base Substitution 0 INTRON HET FN1229-S Chr7 25878110 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr7 28706966 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr7 2938249 2938250 0 0 Deletion 1 FN1229-S Chr7 7773468 7773473 0 0 Deletion 5 LOC_Os07g13560 retrotransposon protein, putative, unclassified, expressed FN1229-S Chr8 10296066 10296067 0 0 Deletion 1 FN1229-S Chr8 10444460 10444461 0 0 Deletion 1 LOC_Os08g17060 expressed protein FN1229-S Chr8 19863755 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g32020 retrotransposon protein, putative, unclassified, expressed FN1229-S Chr8 21337303 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr8 23138860 23138865 0 0 Deletion 5 FN1229-S Chr8 5708668 5708671 0 0 Deletion 3 LOC_Os08g09890 expressed protein FN1229-S Chr9 11395074 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN1229-S Chr9 11414275 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1229-S Chr9 11988770 11988776 0 0 Deletion 6 LOC_Os09g20010 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed FN1229-S Chr9 3172181 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr9 826549 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr9 8330241 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass FN1229-S Chr9 900638 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1229-S Chr9 9188696 A-C 0 0 Single Base Substitution 0 INTERGENIC HET