FN1236-S Chr1 10024595 10024603 0 0 Deletion 8 FN1236-S Chr1 13418289 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1236-S Chr1 25774994 25774999 0 0 Deletion 5 FN1236-S Chr1 30214974 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr1 31336721 31338742 0 0 Deletion 2021 LOC_Os01g54480 serine/threonine protein kinase, putative, expressed FN1236-S Chr10 11057136 A-T 0 0 Single Base Substitution 0 INTRON HET FN1236-S Chr10 14824940 14824942 0 0 Deletion 2 FN1236-S Chr10 8605251 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1236-S Chr10 9237828 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr11 13735228 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr11 16073285 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr11 28275745 28275815 0 0 Deletion 70 FN1236-S Chr12 10003925 A-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os12g17460 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr12 10896074 11405108 0 0 Inversion 509034 FN1236-S Chr12 12094515 12094520 0 0 Deletion 5 FN1236-S Chr12 18183166 18183173 0 0 Deletion 7 FN1236-S Chr12 21941843 21941844 0 0 Deletion 1 FN1236-S Chr12 2564216 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g13980 conserved hypothetical protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g13990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14010 retrotransposon protein, putative, unclassified FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14030 hypothetical protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14040 retrotransposon protein, putative, Ty3-gypsy subclass FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14059 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14070 DnaK family protein, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14080 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14090 hypothetical protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14100 amino acid transporter, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14110 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14120 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14126 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14132 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14140 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14150 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14160 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14180 transposon protein, putative, CACTA, En/Spm sub-class FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14210 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14220 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14224 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14230 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14250 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14270 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14310 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14320 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14330 disease resistance protein RPM1, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14340 hypothetical protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14350 transposon protein, putative, CACTA, En/Spm sub-class FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14360 transposon protein, putative, unclassified, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14374 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14420 retrotransposon protein, putative, Ty3-gypsy subclass FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14430 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14440 Jacalin-like lectin domain containing protein, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14450 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14460 retrotransposon protein, putative, Ty3-gypsy subclass FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14480 cysteine-rich receptor-like protein kinase 23 precursor, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14490 retrotransposon protein, putative, unclassified FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14500 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14510 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14520 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14530 retrotransposon protein, putative, unclassified FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14540 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14550 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14570 hypothetical protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14580 tetraspanin family protein, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14590 retrotransposon protein, putative, unclassified FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14610 cysteine-rich receptor-like protein kinase 32 precursor, putative, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14630 retrotransposon protein, putative, LINE subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14640 transposon protein, putative, CACTA, En/Spm sub-class FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14660 expressed protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14670 hypothetical protein FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14680 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1236-S Chr12 7940232 8418178 0 0 Deletion 477946 LOC_Os12g14699 protein kinase domain containing protein, expressed FN1236-S Chr12 7940236 10795722 0 0 Inversion 2855486 FN1236-S Chr12 8418176 10795721 0 0 Inversion 2377545 FN1236-S Chr2 20271875 20271875 0 0 Insertion 1 FN1236-S Chr2 20273734 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr2 25177672 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1236-S Chr2 26705635 26719035 0 0 Deletion 13400 LOC_Os02g44134 thioesterase family protein, putative, expressed FN1236-S Chr2 26705635 26719035 0 0 Deletion 13400 LOC_Os02g44136 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1236-S Chr2 27059614 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1236-S Chr2 32754303 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13890 FYVE zinc finger domain containing protein, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13900 BES1/BZR1 homolog protein, putative, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13910 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13920 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13930 expressed protein FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13940 expressed protein FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13950 NHL repeat-containing protein, putative, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13960 spotted leaf 11, putative, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13965 lectin protein kinase family protein, putative, expressed FN1236-S Chr2 7540001 7624000 0 0 Deletion 84000 LOC_Os02g13970 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed FN1236-S Chr3 28494289 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr3 8674630 8726603 0 0 Inversion 51973 LOC_Os03g15730 S-RNase-binding protein, putative, expressed FN1236-S Chr3 8674630 8726603 0 0 Inversion 51973 LOC_Os03g15810 AAA-type ATPase family protein, putative, expressed FN1236-S Chr4 10018900 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr4 10061159 10061162 0 0 Deletion 3 FN1236-S Chr4 14740305 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr4 19851757 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g32880 CBS domain containing membrane protein, putative, expressed FN1236-S Chr4 24827752 24827758 0 0 Deletion 6 FN1236-S Chr4 25914423 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN1236-S Chr4 4990371 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr4 5233792 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr5 13915904 Chr2 26705648 0 Translocation 0 LOC_Os02g44134 thioesterase family protein, putative, expressed FN1236-S Chr5 1697516 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr5 24200394 G-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os05g41310 disease resistance protein RGA2, putative, expressed FN1236-S Chr5 24262698 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g17950 NBS-LRR disease resistance protein, putative, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g17960 expressed protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g17970 NBS-LRR disease resistance protein, putative, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g17980 hypothetical protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g17990 expressed protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18000 protein kinase domain containing protein, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18010 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18020 expressed protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18040 hypothetical protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18058 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18080 collagen adhesion protein, putative, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18110 transposon protein, putative, unclassified, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18120 expressed protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18130 retrotransposon protein, putative, LINE subclass, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18140 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18150 expressed protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18160 expressed protein FN1236-S Chr6 10441001 10586000 0 0 Deletion 145000 LOC_Os06g18164 expressed protein FN1236-S Chr6 10441014 10588606 0 0 Inversion 147592 LOC_Os06g17950 NBS-LRR disease resistance protein, putative, expressed FN1236-S Chr6 10441014 10588606 0 0 Inversion 147592 LOC_Os06g18670 anthocyanidin 3-O-glucosyltransferase, putative, expressed FN1236-S Chr6 10585976 10588611 0 0 Inversion 2635 LOC_Os06g18670 anthocyanidin 3-O-glucosyltransferase, putative, expressed FN1236-S Chr6 11886533 11952574 0 0 Inversion 66041 FN1236-S Chr6 4154261 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr6 7491401 7491405 0 0 Deletion 4 FN1236-S Chr7 11143768 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1236-S Chr7 1147254 1147254 0 0 Insertion 1 FN1236-S Chr7 27740435 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr7 4084882 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1236-S Chr7 5991352 C-T 0 0 Single Base Substitution 0 INTRON HET FN1236-S Chr8 11604051 11604069 0 0 Deletion 18 FN1236-S Chr8 13496842 13496843 0 0 Deletion 1 FN1236-S Chr8 13982912 13982920 0 0 Deletion 8 FN1236-S Chr8 14222682 Chr6 14069920 0 Translocation 0 FN1236-S Chr8 15691473 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1236-S Chr8 25014946 25014959 0 0 Deletion 13 FN1236-S Chr8 26627350 26627359 0 0 Deletion 9 LOC_Os08g42140 retrotransposon protein, putative, unclassified, expressed FN1236-S Chr8 26850950 26850959 0 0 Deletion 9 FN1236-S Chr8 3214494 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr9 12798141 12798150 0 0 Deletion 9 FN1236-S Chr9 15370035 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1236-S Chr9 16416249 16416251 0 0 Deletion 2 FN1236-S Chr9 2710054 T-C 0 0 Single Base Substitution 0 INTERGENIC HET