FN1258-S Chr1 36853369 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr1 41648714 41648722 0 0 Deletion 8 FN1258-S Chr1 4580688 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr1 8701008 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr10 11927853 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr10 13040938 13040938 0 0 Insertion 7 FN1258-S Chr10 2429077 2483020 0 0 Inversion 53943 LOC_Os10g05069 lysosomal alpha-mannosidase precursor, putative, expressed FN1258-S Chr10 6259016 6259020 0 0 Deletion 4 LOC_Os10g11280 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr10 7883421 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g15060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g16990 expressed protein FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17000 expressed protein FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17010 expressed protein FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17020 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17030 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17040 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17070 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17080 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17090 transposon protein, putative, unclassified FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17100 expressed protein FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17110 retrotransposon protein, putative, unclassified FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17120 expressed protein FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17130 retrotransposon protein, putative, Ty3-gypsy subclass FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17150 retrotransposon protein, putative, unclassified FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17180 retrotransposon protein, putative, Ty3-gypsy subclass FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17210 retrotransposon protein, putative, unclassified FN1258-S Chr10 8506001 8664000 0 0 Deletion 158000 LOC_Os10g17220 retrotransposon, putative, centromere-specific FN1258-S Chr11 18092514 18092531 0 0 Deletion 17 FN1258-S Chr11 19390024 Chr3 4264017 0 Translocation 0 FN1258-S Chr11 25229965 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr11 2617955 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr11 3434537 3434539 0 0 Deletion 2 FN1258-S Chr11 3828535 3828544 0 0 Deletion 9 FN1258-S Chr12 1235460 1235484 0 0 Deletion 24 FN1258-S Chr12 12465494 12465516 0 0 Deletion 22 FN1258-S Chr12 15304618 Chr4 1265206 0 Translocation 0 FN1258-S Chr12 18045129 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g30120 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr12 6810152 6810160 0 0 Deletion 8 FN1258-S Chr2 19617462 19617472 0 0 Deletion 10 FN1258-S Chr2 24662479 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr2 29362956 29362959 0 0 Deletion 3 FN1258-S Chr2 35623982 35624001 0 0 Deletion 19 FN1258-S Chr2 9109901 C-A 0 0 Single Base Substitution 0 INTRON HET FN1258-S Chr3 14495324 14495326 0 0 Deletion 2 FN1258-S Chr3 18239542 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g31880 SHORT-ROOT, putative, expressed FN1258-S Chr3 2205421 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1258-S Chr3 33029503 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr3 3848901 3848912 0 0 Deletion 11 FN1258-S Chr3 3849135 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1258-S Chr4 14155898 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1258-S Chr4 18971011 18971035 0 0 Deletion 24 FN1258-S Chr4 21130579 21130579 0 0 Insertion 2 FN1258-S Chr4 21324818 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1258-S Chr4 21324822 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g35080 protein kinase domain containing protein, expressed FN1258-S Chr4 2155663 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr4 22785153 22785162 0 0 Deletion 9 LOC_Os04g38290 expressed protein FN1258-S Chr4 23829802 23829803 0 0 Deletion 1 LOC_Os04g40040 copper methylamine oxidase precursor, putative, expressed FN1258-S Chr4 3703161 3703163 0 0 Deletion 2 FN1258-S Chr4 5107588 5107589 0 0 Deletion 1 FN1258-S Chr4 9081809 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN1258-S Chr5 12316646 14105156 0 0 Inversion 1788510 LOC_Os05g24410 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr5 13819941 14105142 0 0 Inversion 285201 LOC_Os05g23990 rp3 protein, putative, expressed FN1258-S Chr5 13819941 14105142 0 0 Inversion 285201 LOC_Os05g24410 retrotransposon protein, putative, unclassified, expressed FN1258-S Chr5 14967461 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr5 17538135 17538142 0 0 Deletion 7 LOC_Os05g30260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr5 22550101 Chr3 23592967 0 Translocation 0 FN1258-S Chr5 22965347 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr5 26462003 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr5 3122092 3122105 0 0 Deletion 13 LOC_Os05g06200 transposon protein, putative, unclassified, expressed FN1258-S Chr5 4082372 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1258-S Chr5 8720311 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr5 986725 Chr2 32475676 0 Translocation 0 LOC_Os02g53080 expressed protein FN1258-S Chr5 986725 Chr2 32475676 0 Translocation 0 LOC_Os05g02740 expressed protein FN1258-S Chr6 13772548 13777419 0 0 Deletion 4871 LOC_Os06g23610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1258-S Chr6 13772548 13777419 0 0 Deletion 4871 LOC_Os06g23620 expressed protein FN1258-S Chr6 13772548 13777419 0 0 Deletion 4871 LOC_Os06g23630 transposon protein, putative, CACTA, En/Spm sub-class FN1258-S Chr6 702768 702773 0 0 Deletion 5 FN1258-S Chr6 8256701 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1258-S Chr7 14716916 14716927 0 0 Deletion 11 FN1258-S Chr7 18151365 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr8 16438848 16438848 0 0 Insertion 8 FN1258-S Chr8 24152418 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr8 24708051 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr8 25035215 25035216 0 0 Deletion 1 LOC_Os08g39570 Leucine Rich Repeat family protein, expressed FN1258-S Chr8 406748 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1258-S Chr8 5586401 5586402 0 0 Deletion 1 FN1258-S Chr9 14001163 14001187 0 0 Deletion 24 FN1258-S Chr9 3427107 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g07070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1258-S Chr9 3427108 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1258-S Chr9 7897886 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO