FN1262-S Chr1 18068605 18068617 0 0 Deletion 12 FN1262-S Chr1 25445817 26307622 0 0 Inversion 861805 LOC_Os01g44350 expressed protein FN1262-S Chr1 25445836 26307632 0 0 Inversion 861796 LOC_Os01g44350 expressed protein FN1262-S Chr1 39604030 39604034 0 0 Deletion 4 FN1262-S Chr1 4550369 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr1 4669809 4669811 0 0 Deletion 2 FN1262-S Chr1 4747817 A-G 0 0 Single Base Substitution 0 INTRON HET FN1262-S Chr10 12041119 12041124 0 0 Deletion 5 FN1262-S Chr10 22806021 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g42364 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1262-S Chr10 2933877 Chr7 6953401 0 Translocation 0 LOC_Os07g12330 tryptophan/tyrosine permease family protein, putative, expressed FN1262-S Chr10 2933877 Chr7 6953401 0 Translocation 0 LOC_Os10g05800 F-box protein family, AtFBL4, putative, expressed FN1262-S Chr10 2933889 Chr7 6955434 0 Translocation 0 LOC_Os07g12330 tryptophan/tyrosine permease family protein, putative, expressed FN1262-S Chr10 2933889 Chr7 6955434 0 Translocation 0 LOC_Os10g05800 F-box protein family, AtFBL4, putative, expressed FN1262-S Chr11 17601395 17601399 0 0 Deletion 4 LOC_Os11g30310 reticuline oxidase-like protein precursor, putative, expressed FN1262-S Chr11 25650477 Chr7 9569138 0 Translocation 0 LOC_Os11g42610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1262-S Chr11 5851223 5851233 0 0 Deletion 10 FN1262-S Chr12 14693223 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1262-S Chr12 14693241 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1262-S Chr12 15284223 Chr10 15776444 0 Translocation 0 FN1262-S Chr12 15706585 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr12 18432680 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g30690 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr12 27162429 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1262-S Chr12 3079312 3079335 0 0 Deletion 23 FN1262-S Chr12 3680394 3680394 0 0 Insertion 1 FN1262-S Chr12 8921079 8921084 0 0 Deletion 5 LOC_Os12g15620 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr2 11313534 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr2 21814741 21814743 0 0 Deletion 2 FN1262-S Chr2 21845783 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05400 transmembrane protein 15, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05410 splicing factor 3B subunit 1, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05420 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05430 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05440 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05450 Homeobox domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05460 hypothetical protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05470 CCT motif family protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05480 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05490 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05500 pyridoxamine 5'-phosphate oxidase family protein, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05510 GATA transcription factor 25, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05520 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05530 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05540 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05550 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05560 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05570 transposon protein, putative, CACTA, En/Spm sub-class FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05580 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05590 ribosome inactivating protein, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05600 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05610 ZOS2-03 - C2H2 zinc finger protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05620 ATEXO70G1, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05630 protein phosphatase 2C, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05640 homeobox associated leucine zipper, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05650 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05660 DEAD-box ATP-dependent RNA helicase 35A, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05670 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05680 apoptosis-inducing factor 2, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05686 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05692 zinc finger, C3HC4 type domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05700 OsFBO8 - F-box and other domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05710 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05720 pentatricopeptide repeat protein PPR986-12, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05730 protein kinase domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05744 endoglucanase, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05760 hypothetical protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05770 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05780 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05790 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05800 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05810 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05820 protein kinase domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05830 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05840 VIL2 protein, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05850 transposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05860 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05870 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05880 RNA polymerase Rpb1, domain 2 family protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05890 EMB1303, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05900 ternary complex factor MIP1, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05910 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05920 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05930 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05940 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05950 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05960 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05970 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05980 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g05990 transposon protein, putative, unclassified FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06000 transposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06010 integral membrane protein, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06030 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06040 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06050 transposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06060 hypothetical protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06070 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06080 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06090 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06100 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06110 transposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06120 Leucine Rich Repeat family protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06130 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06140 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06150 brassinosteroid LRR receptor kinase precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06160 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06170 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06180 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06190 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06200 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06205 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06210 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06215 RNA-directed DNA polymerase, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06220 receptor protein kinase-like protein At4g34220 precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06230 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06240 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06250 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06260 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06270 phytosulfokine receptor precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06280 receptor-like protein kinase 2 precursor, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06290 rhodanese-like domain containing protein, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06300 GTP-binding protein lepA, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06310 expressed protein FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06320 RNA recognition motif 2 domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06330 AP2 domain containing protein, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06340 EH domain-containing protein 1, putative, expressed FN1262-S Chr2 2592001 3175000 0 0 Deletion 583000 LOC_Os02g06350 expressed protein FN1262-S Chr2 28071515 28071516 0 0 Deletion 1 FN1262-S Chr2 6697909 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr2 6835836 6835837 0 0 Deletion 1 FN1262-S Chr2 7720789 7720790 0 0 Deletion 1 LOC_Os02g14130 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN1262-S Chr3 14302760 14302763 0 0 Deletion 3 LOC_Os03g25060 expressed protein FN1262-S Chr3 25588216 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g45320 dehydrogenase, putative, expressed FN1262-S Chr3 29419488 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr3 36259793 36259801 0 0 Deletion 8 FN1262-S Chr4 15342785 15342786 0 0 Deletion 1 LOC_Os04g26320 mannose-binding lectin, putative, expressed FN1262-S Chr4 16221189 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr4 16359426 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30860 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30870 transposon protein, putative, unclassified, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30880 TBC domain containing protein, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30890 MYB family transcription factor, putative, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30900 transposon protein, putative, unclassified, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30910 SAM domain family protein, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30920 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30930 NB-ARC domain containing protein, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30940 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30950 hypothetical protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30960 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30970 hypothetical protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30980 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g30990 transposon protein, putative, unclassified, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31000 methyltransferase domain containing protein, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31010 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31020 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31030 nitrate-induced NOI protein, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31040 violaxanthin de-epoxidase, putative, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31050 expressed protein FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31070 acyl-desaturase, chloroplast precursor, putative, expressed FN1262-S Chr4 18433001 18580000 0 0 Deletion 147000 LOC_Os04g31080 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1262-S Chr4 18844341 18844357 0 0 Deletion 16 FN1262-S Chr4 20440159 20440159 0 0 Insertion 1 FN1262-S Chr4 25834734 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1262-S Chr4 29641694 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1262-S Chr5 10091870 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1262-S Chr5 29434700 29434706 0 0 Deletion 6 LOC_Os05g51310 retrotransposon protein, putative, unclassified FN1262-S Chr5 4054398 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr6 13833746 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr6 1521977 1521985 0 0 Deletion 8 FN1262-S Chr6 17689497 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os06g30570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1262-S Chr6 19818562 19818565 0 0 Deletion 3 FN1262-S Chr6 5434705 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr6 8161206 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr6 8875050 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr6 9637563 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr7 15360970 15361008 0 0 Deletion 38 FN1262-S Chr7 15378907 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr7 15378911 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr7 17776043 17776047 0 0 Deletion 4 FN1262-S Chr7 29269737 29269738 0 0 Deletion 1 LOC_Os07g48910 retrotransposon protein, putative, unclassified, expressed FN1262-S Chr7 3264558 3264564 0 0 Deletion 6 FN1262-S Chr7 831442 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr8 22551778 22551797 0 0 Deletion 19 FN1262-S Chr8 22969480 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1262-S Chr8 24397792 24397801 0 0 Deletion 9 FN1262-S Chr8 27365830 27365907 0 0 Deletion 77 FN1262-S Chr9 2405570 2405575 0 0 Deletion 5 FN1262-S Chr9 6738443 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1262-S Chr9 8941257 Chr1 30237197 0 Translocation 0