FN1272-S Chr1 11344916 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr1 17025131 17025133 0 0 Deletion 2 LOC_Os01g31124 expressed protein FN1272-S Chr1 22968597 22968605 0 0 Deletion 8 FN1272-S Chr1 25247238 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1272-S Chr1 26876338 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1272-S Chr1 27666127 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HOMO FN1272-S Chr1 28269005 28269015 0 0 Deletion 10 FN1272-S Chr1 4490809 4490816 0 0 Deletion 7 FN1272-S Chr1 8210443 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr10 12636604 12636838 0 0 Deletion 234 LOC_Os10g24620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1272-S Chr10 13593503 13593515 0 0 Deletion 12 LOC_Os10g26250 no apical meristem protein, putative, expressed FN1272-S Chr10 1643330 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g03669 expressed protein FN1272-S Chr10 22679505 Chr8 339586 0 Translocation 0 FN1272-S Chr10 3473742 3473743 0 0 Deletion 1 LOC_Os10g06710 amidase, putative, expressed FN1272-S Chr10 6703058 6703066 0 0 Deletion 8 FN1272-S Chr11 1247202 G-A 0 0 Single Base Substitution 0 INTRON HET FN1272-S Chr11 13437945 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g23760 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1272-S Chr11 1475120 Chr9 18649922 0 Translocation 0 LOC_Os11g03760 expressed protein FN1272-S Chr11 1481170 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr11 19893548 Chr4 32806663 0 Translocation 0 LOC_Os04g55180 hydrolase, alpha/beta fold family domain containing protein, expressed FN1272-S Chr11 19893581 Chr4 32806838 0 Translocation 0 LOC_Os04g55180 hydrolase, alpha/beta fold family domain containing protein, expressed FN1272-S Chr11 22041003 22041011 0 0 Deletion 8 LOC_Os11g37330 pentatricopeptide repeat domain containing protein, putative, expressed FN1272-S Chr11 22169094 Chr2 10151790 0 Translocation 0 LOC_Os11g37540 protein phosphatase 2C, putative, expressed FN1272-S Chr11 7444305 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1272-S Chr12 24994311 24994311 0 0 Insertion 2 LOC_Os12g40360 OsFBX460 - F-box domain containing protein, expressed FN1272-S Chr12 9680358 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr2 128555 C-T 0 0 Single Base Substitution 0 INTRON HET FN1272-S Chr2 13937360 T-C 0 0 Single Base Substitution 0 INTRON HET FN1272-S Chr3 11892663 11892663 0 0 Insertion 1 FN1272-S Chr3 18712750 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr3 26314526 26314529 0 0 Deletion 3 LOC_Os03g46500 OsFBX102 - F-box domain containing protein, expressed FN1272-S Chr3 27956670 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g49070 expressed protein FN1272-S Chr3 28315755 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1272-S Chr3 28990565 28990571 0 0 Deletion 6 LOC_Os03g50780 PHD-finger domain containing protein, putative, expressed FN1272-S Chr4 10384185 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1272-S Chr4 26111836 26111839 0 0 Deletion 3 LOC_Os04g44100 expressed protein FN1272-S Chr4 27604008 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr4 30736275 30736391 0 0 Deletion 116 FN1272-S Chr4 31490833 31490833 0 0 Insertion 3 FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53810 leucoanthocyanidin reductase, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53820 transposon protein, putative, unclassified, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53830 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53840 expressed protein FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53850 leucoanthocyanidin reductase, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53860 reductase, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53870 retrotransposon protein, putative, unclassified, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53880 retrotransposon protein, putative, unclassified, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53900 retrotransposon protein, putative, unclassified FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53910 retrotransposon protein, putative, unclassified FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53920 leucoanthocyanidin reductase, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53930 organic cation transporter protein, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53940 hypothetical protein FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53950 glycosyl hydrolases family 16 protein, protein, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53970 expressed protein FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53980 transposon protein, putative, unclassified FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53990 ethylene-responsive protein related, putative, expressed FN1272-S Chr4 32063159 32175544 0 0 Deletion 112385 LOC_Os04g53994 kinase, putative, expressed FN1272-S Chr4 32223758 32248306 0 0 Deletion 24548 LOC_Os04g54070 receptor-like kinase, putative, expressed FN1272-S Chr4 32223758 32248306 0 0 Deletion 24548 LOC_Os04g54080 serine/threonine-protein kinase receptor precursor, putative, expressed FN1272-S Chr4 32223758 32248306 0 0 Deletion 24548 LOC_Os04g54090 RALFL18 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN1272-S Chr4 32223758 32248306 0 0 Deletion 24548 LOC_Os04g54100 exostosin family protein, putative, expressed FN1272-S Chr4 32223758 32248306 0 0 Deletion 24548 LOC_Os04g54110 ARK3, putative, expressed FN1272-S Chr4 32223758 32248306 0 0 Deletion 24548 LOC_Os04g54120 serine/threonine-protein kinase receptor precursor, putative, expressed FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55100 expressed protein FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55110 expressed protein FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55120 jp18, putative, expressed FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55130 expressed protein FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55140 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55150 UBA/TS-N domain containing protein, expressed FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55159 LTPL125 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55170 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1272-S Chr4 32763001 32807000 0 0 Deletion 44000 LOC_Os04g55180 hydrolase, alpha/beta fold family domain containing protein, expressed FN1272-S Chr4 33710198 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1272-S Chr4 5312729 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g09880 expressed protein FN1272-S Chr4 6034714 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g11090 retrotransposon protein, putative, unclassified, expressed FN1272-S Chr5 13287153 13287156 0 0 Deletion 3 FN1272-S Chr5 15319815 15319817 0 0 Deletion 2 FN1272-S Chr5 2184407 2184415 0 0 Deletion 8 FN1272-S Chr5 26890059 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1272-S Chr6 10822071 G-A 0 0 Single Base Substitution 0 INTRON HET FN1272-S Chr6 13952718 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr6 26810934 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g44410 histidine kinase, putative, expressed FN1272-S Chr6 3020073 3020077 0 0 Deletion 4 FN1272-S Chr6 30436203 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1272-S Chr6 8003720 8140678 0 0 Inversion 136958 LOC_Os06g14350 caleosin related protein, putative, expressed FN1272-S Chr6 8141001 8150000 0 0 Deletion 9000 LOC_Os06g14480 retrotransposon protein, putative, Ty3-gypsy subclass FN1272-S Chr6 8141001 8150000 0 0 Deletion 9000 LOC_Os06g14490 calmodulin-binding heat-shock protein, putative, expressed FN1272-S Chr6 8141001 8150000 0 0 Deletion 9000 LOC_Os06g14500 expressed protein FN1272-S Chr6 8149686 8777209 0 0 Inversion 627523 LOC_Os06g15460 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1272-S Chr6 8616303 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr7 10222575 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1272-S Chr7 13497752 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1272-S Chr7 15450963 15450964 0 0 Deletion 1 FN1272-S Chr7 20783800 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1272-S Chr7 23009928 23009992 0 0 Deletion 64 FN1272-S Chr7 23100994 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr7 23747951 Chr6 8784947 0 Translocation 0 LOC_Os06g15470 retrotransposon protein, putative, unclassified, expressed FN1272-S Chr7 23747951 Chr6 8784947 0 Translocation 0 LOC_Os07g39620 C2 domain containing protein, putative, expressed FN1272-S Chr7 23747957 Chr6 8785194 0 Translocation 0 LOC_Os06g15470 retrotransposon protein, putative, unclassified, expressed FN1272-S Chr7 23747957 Chr6 8785194 0 Translocation 0 LOC_Os07g39620 C2 domain containing protein, putative, expressed FN1272-S Chr7 27294551 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr7 7051152 7051153 0 0 Deletion 1 FN1272-S Chr7 7828659 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1272-S Chr8 13777220 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1272-S Chr8 1656665 1656669 0 0 Deletion 4 LOC_Os08g03560 chloroplast unusual positioning protein, putative, expressed FN1272-S Chr8 8079036 8079037 0 0 Deletion 1 LOC_Os08g13590 retrotransposon protein, putative, unclassified, expressed FN1272-S Chr9 17997157 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1272-S Chr9 4005437 4005442 0 0 Deletion 5 LOC_Os09g07880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1272-S Chr9 4383873 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g08420 AGC_PVPK_like_kin82y.15 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN1272-S Chr9 4781773 4781773 0 0 Insertion 2 FN1272-S Chr9 8819107 8819108 0 0 Deletion 1