FN1300-S Chr1 21795702 21795722 0 0 Deletion 20 FN1300-S Chr1 21795728 A-G 0 0 Single Base Substitution 0 INTRON HET FN1300-S Chr1 22242179 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr1 28254768 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr1 28362070 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr1 36792240 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr1 9097463 A-T 0 0 Single Base Substitution 0 START_GAINED HOMO LOC_Os01g16124 retrotransposon protein, putative, unclassified, expressed FN1300-S Chr1 9229015 9229196 0 0 Deletion 181 FN1300-S Chr10 18451355 18451961 0 0 Deletion 606 LOC_Os10g34614 csAtPR5, putative, expressed FN1300-S Chr10 18451953 Chr1 40551102 0 Translocation 0 LOC_Os01g70060 protein of unknown function, DUF618 domain containing protein, expressed FN1300-S Chr10 18451953 Chr1 40551102 0 Translocation 0 LOC_Os10g34614 csAtPR5, putative, expressed FN1300-S Chr10 8906351 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr11 11919711 A-C 0 0 Single Base Substitution 0 INTRON HET FN1300-S Chr11 14480752 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1300-S Chr11 15675759 15675760 0 0 Deletion 1 FN1300-S Chr11 18008933 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr11 23911627 23911632 0 0 Deletion 5 FN1300-S Chr11 26946582 26946585 0 0 Deletion 3 LOC_Os11g44560 protein kinase domain containing protein, expressed FN1300-S Chr11 28731447 Chr7 13335232 0 Translocation 0 FN1300-S Chr12 11289335 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr12 19259832 19259850 0 0 Deletion 18 FN1300-S Chr12 24040191 24040192 0 0 Deletion 1 FN1300-S Chr12 296212 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr12 395411 395431 0 0 Deletion 20 FN1300-S Chr12 4249794 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN1300-S Chr2 10199560 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN1300-S Chr2 15285233 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr2 15285234 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr2 26002795 26002804 0 0 Deletion 9 FN1300-S Chr2 26123713 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr2 28081723 28081723 0 0 Insertion 2 LOC_Os02g46080 protein phosphatase 2C, putative, expressed FN1300-S Chr2 31020086 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr2 31083289 31083301 0 0 Deletion 12 LOC_Os02g50850 BAH domain containing protein, putative, expressed FN1300-S Chr2 7362241 7362243 0 0 Deletion 2 FN1300-S Chr2 842838 1650505 0 0 Inversion 807667 FN1300-S Chr2 842859 1650548 0 0 Inversion 807689 FN1300-S Chr3 11593805 11593814 0 0 Deletion 9 FN1300-S Chr3 33150091 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr3 33586772 33586780 0 0 Deletion 8 LOC_Os03g58980 Cupin domain containing protein, expressed FN1300-S Chr3 381152 381152 0 0 Insertion 6 FN1300-S Chr4 13642522 13642523 0 0 Deletion 1 LOC_Os04g23890 AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN1300-S Chr4 19045630 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1300-S Chr4 32039654 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr4 34557802 G-C 0 0 Single Base Substitution 0 INTRON HET FN1300-S Chr4 34695712 34695715 0 0 Deletion 3 LOC_Os04g58280 stem-specific protein TSJT1, putative, expressed FN1300-S Chr5 11881085 11881087 0 0 Deletion 2 LOC_Os05g20280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1300-S Chr5 18396997 18397003 0 0 Deletion 6 LOC_Os05g31610 Leucine Rich Repeat family protein, expressed FN1300-S Chr5 20369899 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr5 24126885 24126885 0 0 Insertion 1 FN1300-S Chr5 6316576 6316576 0 0 Insertion 6 FN1300-S Chr6 14404852 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1300-S Chr6 15519100 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr6 21417374 21417375 0 0 Deletion 1 LOC_Os06g36480 no apical meristem protein, putative, expressed FN1300-S Chr6 25778143 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr6 27328960 27328963 0 0 Deletion 3 FN1300-S Chr6 30442121 30442122 0 0 Deletion 1 LOC_Os06g50290 transposon protein, putative, Pong sub-class, expressed FN1300-S Chr6 9008123 9008125 0 0 Deletion 2 FN1300-S Chr7 12290968 12290969 0 0 Deletion 1 FN1300-S Chr7 12716282 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr7 13372615 Chr3 24067443 0 Translocation 0 LOC_Os07g23680 retrotransposon protein, putative, Ty3-gypsy subclass FN1300-S Chr7 13373336 Chr3 24067421 0 Translocation 0 LOC_Os07g23690 root cap protein 1, putative, expressed FN1300-S Chr7 16000086 16000087 0 0 Deletion 1 FN1300-S Chr7 2395979 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr7 27801052 27801097 0 0 Deletion 45 FN1300-S Chr7 5587234 5587247 0 0 Deletion 13 FN1300-S Chr7 8599512 8599519 0 0 Deletion 7 FN1300-S Chr8 11758754 11758768 0 0 Deletion 14 LOC_Os08g19650 homeobox protein knotted-1, putative, expressed FN1300-S Chr8 13441688 13441692 0 0 Deletion 4 FN1300-S Chr8 14153436 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr8 14182665 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr8 17607648 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr8 18551859 18551867 0 0 Deletion 8 FN1300-S Chr8 4074305 4074325 0 0 Deletion 20 FN1300-S Chr8 7063111 C-T 0 0 Single Base Substitution 0 INTRON HET FN1300-S Chr9 15125630 15125630 0 0 Insertion 3 FN1300-S Chr9 17269640 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1300-S Chr9 364078 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr9 4279967 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1300-S Chr9 8019088 8019089 0 0 Deletion 1