FN1326-S Chr1 15133001 15168000 0 0 Deletion 35000 LOC_Os01g27150 cullin, putative, expressed FN1326-S Chr1 15133001 15168000 0 0 Deletion 35000 LOC_Os01g27160 cullin, putative, expressed FN1326-S Chr1 15133001 15168000 0 0 Deletion 35000 LOC_Os01g27170 potassium transporter, putative, expressed FN1326-S Chr1 15133001 15168000 0 0 Deletion 35000 LOC_Os01g27180 expressed protein FN1326-S Chr1 15133001 15168000 0 0 Deletion 35000 LOC_Os01g27190 C2 domain containing protein, putative, expressed FN1326-S Chr1 18010296 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr1 22191320 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1326-S Chr1 24582505 24582512 0 0 Deletion 7 FN1326-S Chr1 26384390 T-C 0 0 Single Base Substitution 0 INTRON HET FN1326-S Chr1 27711203 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr1 34064088 34064088 0 0 Insertion 2 FN1326-S Chr1 35331868 35331875 0 0 Deletion 7 FN1326-S Chr1 8886536 8886536 0 0 Insertion 2 FN1326-S Chr10 17516789 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr10 19133335 19133335 0 0 Insertion 6 LOC_Os10g35770 E2F-related protein, putative, expressed FN1326-S Chr10 21055399 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN1326-S Chr11 11897948 Chr2 16427122 0 Translocation 0 LOC_Os02g27740 expressed protein FN1326-S Chr11 15535648 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr11 15551173 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27530 FHA domain containing protein, putative, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27540 CRP7 - Cysteine-rich family protein precursor, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27550 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27560 hypothetical protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27580 retrotransposon protein, putative, unclassified FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27600 keratin, type I cytoskeletal 50 kDa, putative, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27610 transposon protein, putative, CACTA, En/Spm sub-class FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27620 dirigent, putative, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27630 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27640 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27650 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27660 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27670 retrotransposon, putative, centromere-specific FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27680 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27690 retrotransposon protein, putative, Ty3-gypsy subclass FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27710 transposon protein, putative, unclassified, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27730 cytochrome P450, putative, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27750 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27780 retrotransposon protein, putative, Ty3-gypsy subclass FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27790 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27795 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27799 expressed protein FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27810 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr11 15838001 16025000 0 0 Deletion 187000 LOC_Os11g27830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr11 15838126 16670070 0 0 Inversion 831944 FN1326-S Chr11 16024914 16117694 0 0 Inversion 92780 FN1326-S Chr11 16083001 16118000 0 0 Deletion 35000 LOC_Os11g27960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1326-S Chr11 16083001 16118000 0 0 Deletion 35000 LOC_Os11g27970 glycine-rich cell wall structural protein 1 precursor, putative, expressed FN1326-S Chr11 16083001 16118000 0 0 Deletion 35000 LOC_Os11g27980 lipase class 3 family protein, putative, expressed FN1326-S Chr11 16083001 16118000 0 0 Deletion 35000 LOC_Os11g27990 hypothetical protein FN1326-S Chr11 16083001 16118000 0 0 Deletion 35000 LOC_Os11g28000 expressed protein FN1326-S Chr11 16083001 16118000 0 0 Deletion 35000 LOC_Os11g28010 hypothetical protein FN1326-S Chr12 1758264 1767271 0 0 Deletion 9007 LOC_Os12g04180 RNA recognition motif containing protein, expressed FN1326-S Chr12 1758264 1767271 0 0 Deletion 9007 LOC_Os12g04200 GRAS family transcription factor containing protein, expressed FN1326-S Chr12 1758268 Chr3 32923122 0 Translocation 0 LOC_Os12g04180 RNA recognition motif containing protein, expressed FN1326-S Chr12 1767261 Chr3 32923077 0 Translocation 0 LOC_Os12g04200 GRAS family transcription factor containing protein, expressed FN1326-S Chr12 19316547 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr12 22272343 T-G 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g36380 retrotransposon protein, putative, unclassified FN1326-S Chr12 4624099 4624099 0 0 Insertion 2 FN1326-S Chr2 10952046 10952052 0 0 Deletion 6 FN1326-S Chr2 21997903 T-C 0 0 Single Base Substitution 0 INTRON HET FN1326-S Chr2 22430237 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr2 23987729 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr2 25361513 25361513 0 0 Insertion 2 FN1326-S Chr2 30370446 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr2 3889117 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1326-S Chr2 8016272 T-C 0 0 Single Base Substitution 0 INTRON HET FN1326-S Chr2 8412118 8412118 0 0 Insertion 2 FN1326-S Chr3 16910359 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr3 22372794 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr3 24239070 24239071 0 0 Deletion 1 FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54840 hypothetical protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54850 NLI interacting factor-like phosphatase, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54860 60S ribosomal protein L13a-2, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54870 NLI interacting factor-like phosphatase, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54880 antigen peptide transporter-like 2, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54890 ribosomal protein L13, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54900 phytosulfokine receptor precursor, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54910 X8 domain containing protein, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54920 expressed protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54930 VIP4, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54960 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54970 expressed protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54980 expressed protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g54990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55000 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55010 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55014 conserved hypothetical protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55020 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55030 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55034 expressed protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55040 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55050 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55070 UDP-glucose 6-dehydrogenase, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55080 WRKY3, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55090 alpha-glucan phosphorylast isozyme, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55094 hypothetical protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55100 cyclic nucleotide-gated ion channel 2, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55110 26S proteasome non-ATPase regulatory subunit 10, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55120 plastocyanin-like domain containing protein, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55130 expressed protein FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55140 transducin family protein, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55150 eukaryotic translation initiation factor 5A, putative, expressed FN1326-S Chr3 31172001 31396000 0 0 Deletion 224000 LOC_Os03g55164 WRKY4, expressed FN1326-S Chr3 32628869 32628876 0 0 Deletion 7 LOC_Os03g57220 hydroxyacid oxidase 1, putative, expressed FN1326-S Chr3 32789503 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr3 34800830 34800851 0 0 Deletion 21 LOC_Os03g61280 OsMan05 - Endo-Beta-Mannanase, expressed FN1326-S Chr4 10488747 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g18850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1326-S Chr4 12124095 12124122 0 0 Deletion 27 FN1326-S Chr4 16487002 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr4 18921068 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr4 28691246 28691257 0 0 Deletion 11 FN1326-S Chr4 5445368 5445388 0 0 Deletion 20 LOC_Os04g10080 retrotransposon, putative, centromere-specific, expressed FN1326-S Chr4 9508444 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g17360 retrotransposon protein, putative, Ty3-gypsy subclass FN1326-S Chr5 26400503 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g45550 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr5 29658990 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1326-S Chr6 11657242 11657242 0 0 Insertion 2 FN1326-S Chr6 15390298 15390300 0 0 Deletion 2 FN1326-S Chr6 18089270 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1326-S Chr6 21421115 21421115 0 0 Insertion 3 FN1326-S Chr7 11408024 C-T 0 0 Single Base Substitution 0 INTRON HET FN1326-S Chr7 15654076 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr7 23633787 23633789 0 0 Deletion 2 FN1326-S Chr7 23633793 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr7 23995263 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr7 24982855 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr7 8404042 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr7 8729281 8729284 0 0 Deletion 3 FN1326-S Chr8 11622328 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1326-S Chr8 12134766 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HOMO LOC_Os08g20220 retrotransposon protein, putative, unclassified, expressed FN1326-S Chr8 18164358 18164358 0 0 Insertion 2 FN1326-S Chr8 3432290 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN1326-S Chr9 15067187 15067187 0 0 Insertion 2 FN1326-S Chr9 15495562 15495594 0 0 Deletion 32 FN1326-S Chr9 4014541 4014566 0 0 Deletion 25