FN1333-S Chr1 24022409 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g42330 retrotransposon protein, putative, unclassified, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65690 4,5-DOPA dioxygenase extradiol, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65692 expressed protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65700 expressed protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65710 expressed protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65720 expressed protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65730 SET domain containing protein, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65740 plant-specific domain TIGR01615 family protein, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65750 transposon protein, putative, unclassified, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65760 retrotransposon protein, putative, unclassified, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65770 expressed protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65780 glycosyl transferase, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65790 pectinesterase, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65800 powdery mildew resistant protein 5, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65810 expressed protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65820 hypothetical protein FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65830 acyl-desaturase, chloroplast precursor, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65840 pentatricopeptide, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65850 CHD3-type chromatin-remodeling factor PICKLE, putative, expressed FN1333-S Chr1 38144001 38239000 0 0 Deletion 95000 LOC_Os01g65860 ANTH domain containing protein, expressed FN1333-S Chr1 38144049 38534025 0 0 Inversion 389976 FN1333-S Chr1 38238729 38534031 0 0 Inversion 295302 LOC_Os01g65860 ANTH domain containing protein, expressed FN1333-S Chr1 38746306 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr1 40957566 C-T 0 0 Single Base Substitution 0 INTRON HET FN1333-S Chr1 42943249 42943249 0 0 Insertion 4 FN1333-S Chr1 7410910 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr1 9508248 C-A 0 0 Single Base Substitution 0 INTRON HET FN1333-S Chr10 12813098 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr10 12813099 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr10 16807616 16807618 0 0 Deletion 2 LOC_Os10g31990 retrotransposon protein, putative, unclassified, expressed FN1333-S Chr10 19667015 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN1333-S Chr10 19724713 19724715 0 0 Deletion 2 FN1333-S Chr10 20360260 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr10 2735116 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr10 9520794 9520801 0 0 Deletion 7 FN1333-S Chr11 14202280 14202284 0 0 Deletion 4 FN1333-S Chr11 14364504 C-T 0 0 Single Base Substitution 0 INTRON HET FN1333-S Chr11 16744826 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr11 16791344 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr11 22773557 22773562 0 0 Deletion 5 FN1333-S Chr11 24267216 Chr5 2247569 0 Translocation 0 LOC_Os05g04740 helix-loop-helix DNA-binding domain containing protein, expressed FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48060 laccase-22 precursor, putative, expressed FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48064 hypothetical protein FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48070 GDSL-like lipase/acylhydrolase, putative, expressed FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48080 SOR/SNZ family protein, putative, expressed FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48090 helicase conserved C-terminal domain containing protein, expressed FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48100 expressed protein FN1333-S Chr11 28975001 29013000 0 0 Deletion 38000 LOC_Os11g48110 phenylalanine ammonia-lyase, putative, expressed FN1333-S Chr11 6414617 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr11 7629472 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr12 10229918 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr12 11355251 11355256 0 0 Deletion 5 FN1333-S Chr2 14500258 14500258 0 0 Insertion 4 FN1333-S Chr2 16076936 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr2 23186888 23186889 0 0 Deletion 1 FN1333-S Chr2 28847473 28847480 0 0 Deletion 7 LOC_Os02g47270 retrotransposon protein, putative, unclassified, expressed FN1333-S Chr2 29844400 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr2 34019573 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr2 34194291 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr2 34912493 T-G 0 0 Single Base Substitution 0 INTRON HET FN1333-S Chr2 9900242 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr3 12282148 12522799 0 0 Inversion 240651 FN1333-S Chr3 13559330 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr3 14238627 14238630 0 0 Deletion 3 FN1333-S Chr3 15857761 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1333-S Chr3 22460604 22460612 0 0 Deletion 8 FN1333-S Chr3 2413099 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g04980 PHD-finger domain containing protein, putative, expressed FN1333-S Chr3 30960063 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1333-S Chr3 35122160 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr3 36396357 36396370 0 0 Deletion 13 LOC_Os03g64400 oxidoreductase/ transition metal ion binding protein, putative, expressed FN1333-S Chr3 5285290 5285297 0 0 Deletion 7 FN1333-S Chr3 5317502 T-A 0 0 Single Base Substitution 0 INTRON HET FN1333-S Chr3 5317503 T-A 0 0 Single Base Substitution 0 INTRON HET FN1333-S Chr4 16564311 16564311 0 0 Insertion 22 FN1333-S Chr4 28784630 28784632 0 0 Deletion 2 FN1333-S Chr4 29531630 29531639 0 0 Deletion 9 LOC_Os04g49510 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1333-S Chr4 29818327 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr4 8550365 8550366 0 0 Deletion 1 FN1333-S Chr4 9559332 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr5 11805419 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr5 13445163 Chr1 23528510 0 Translocation 0 FN1333-S Chr5 27540455 27540470 0 0 Deletion 15 FN1333-S Chr5 29098538 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1333-S Chr5 29433833 29433864 0 0 Deletion 31 LOC_Os05g51310 retrotransposon protein, putative, unclassified FN1333-S Chr6 14084216 14084226 0 0 Deletion 10 FN1333-S Chr6 15222135 15222137 0 0 Deletion 2 FN1333-S Chr6 20230936 20230951 0 0 Deletion 15 LOC_Os06g34810 expressed protein FN1333-S Chr6 2514634 2514642 0 0 Deletion 8 FN1333-S Chr6 5173487 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr7 15338644 15338645 0 0 Deletion 1 FN1333-S Chr7 16887925 16887936 0 0 Deletion 11 FN1333-S Chr7 19201322 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46039 expressed protein FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46060 expressed protein FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46070 expressed protein FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46080 expressed protein FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46090 expressed protein FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46100 expressed protein FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46110 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46120 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1333-S Chr7 27473001 27530000 0 0 Deletion 57000 LOC_Os07g46130 expressed protein FN1333-S Chr7 2898270 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr7 9441334 9441335 0 0 Deletion 1 FN1333-S Chr8 1791463 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr8 21668966 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1333-S Chr8 22515427 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g35690 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1333-S Chr8 355391 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1333-S Chr8 879117 879117 0 0 Insertion 1 FN1333-S Chr9 3266862 4455833 0 0 Inversion 1188971 LOC_Os09g08540 retrotransposon protein, putative, unclassified, expressed FN1333-S Chr9 3974357 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN1333-S Chr9 5608623 5608631 0 0 Deletion 8