FN1336-S Chr1 18950888 18950891 0 0 Deletion 3 FN1336-S Chr1 20113234 21727996 0 0 Inversion 1614762 LOC_Os01g36280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1336-S Chr1 31357836 31357868 0 0 Deletion 32 FN1336-S Chr1 31538181 T-C 0 0 Single Base Substitution 0 INTRON HET FN1336-S Chr1 36966249 36966256 0 0 Deletion 7 FN1336-S Chr1 37785887 37785890 0 0 Deletion 3 FN1336-S Chr1 40071628 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g68970 HYS1, putative, expressed FN1336-S Chr10 14661947 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr10 17838567 17838567 0 0 Insertion 4 FN1336-S Chr11 10569271 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr11 21914852 21914877 0 0 Deletion 25 FN1336-S Chr12 12161204 12161206 0 0 Deletion 2 LOC_Os12g21640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 20185529 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g33380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 20711488 20711488 0 0 Insertion 2 FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14270 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14310 expressed protein FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14320 expressed protein FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14330 disease resistance protein RPM1, putative, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14340 hypothetical protein FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14350 transposon protein, putative, CACTA, En/Spm sub-class FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14360 transposon protein, putative, unclassified, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14374 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14420 retrotransposon protein, putative, Ty3-gypsy subclass FN1336-S Chr12 8111001 8234000 0 0 Deletion 123000 LOC_Os12g14430 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14480 cysteine-rich receptor-like protein kinase 23 precursor, putative, expressed FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14490 retrotransposon protein, putative, unclassified FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14500 expressed protein FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14510 expressed protein FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14520 expressed protein FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14530 retrotransposon protein, putative, unclassified FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14540 expressed protein FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14550 expressed protein FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14570 hypothetical protein FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14580 tetraspanin family protein, putative, expressed FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14590 retrotransposon protein, putative, unclassified FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14610 cysteine-rich receptor-like protein kinase 32 precursor, putative, expressed FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14630 retrotransposon protein, putative, LINE subclass, expressed FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14640 transposon protein, putative, CACTA, En/Spm sub-class FN1336-S Chr12 8268001 8385000 0 0 Deletion 117000 LOC_Os12g14650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1336-S Chr12 9694176 9695089 0 0 Deletion 913 LOC_Os12g16900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr2 11374827 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr2 132107 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr2 15186206 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr2 19214790 19214790 0 0 Insertion 4 FN1336-S Chr2 26164165 T-C 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN1336-S Chr2 30195787 30195793 0 0 Deletion 6 FN1336-S Chr2 30912658 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr2 4831052 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr3 16176063 16176063 0 0 Insertion 2 FN1336-S Chr3 23552634 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr3 27006202 27006214 0 0 Deletion 12 FN1336-S Chr3 29583615 29583628 0 0 Deletion 13 FN1336-S Chr3 30389174 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g52980 CWF19-like 2, cell cycle control, putative, expressed FN1336-S Chr3 33203983 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr3 33203984 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr3 33203987 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr3 33204761 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g58280 expressed protein FN1336-S Chr3 35364912 G-A 0 0 Single Base Substitution 0 INTRON HET FN1336-S Chr4 21011236 21011236 0 0 Insertion 14 FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39460 NBS-LRR type disease resistance protein, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39470 MYB family transcription factor, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39489 amino acid transporter, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39510 expressed protein FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39520 ZOS4-08 - C2H2 zinc finger protein, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39530 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39540 expressed protein FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39560 expressed protein FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39570 WRKY35, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39580 expressed protein FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39590 fasciclin domain containing protein, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39600 fasciclin domain containing protein, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39610 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39629 RNA recognition motif containing protein, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39650 receptor protein kinase CLAVATA1 precursor, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39660 OsFBDUF22 - F-box and DUF domain containing protein, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39670 expressed protein FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39680 anthranilate phosphoribosyltransferase, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39700 60S ribosomal protein L6, putative, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39710 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39720 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39730 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39740 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39750 retrotransposon protein, putative, unclassified FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39760 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39770 expressed protein FN1336-S Chr4 23505411 23700697 0 0 Deletion 195286 LOC_Os04g39780 AMP-binding enzyme family protein, expressed FN1336-S Chr4 30029335 30029336 0 0 Deletion 1 LOC_Os04g50770 MYB family transcription factor, putative, expressed FN1336-S Chr4 30029340 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g50770 MYB family transcription factor, putative, expressed FN1336-S Chr5 21953974 21953982 0 0 Deletion 8 FN1336-S Chr5 24724013 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr5 3195801 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr5 4243552 4243561 0 0 Deletion 9 LOC_Os05g07860 uvrB/uvrC motif family protein, expressed FN1336-S Chr5 4563070 4563071 0 0 Deletion 1 FN1336-S Chr5 4582177 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN1336-S Chr5 5905596 5905597 0 0 Deletion 1 LOC_Os05g10720 retrotransposon protein, putative, unclassified, expressed FN1336-S Chr5 7181415 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr6 1279638 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr6 1504761 1504762 0 0 Deletion 1 FN1336-S Chr6 28294518 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr7 10886323 10886329 0 0 Deletion 6 LOC_Os07g18370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1336-S Chr7 20618271 20618283 0 0 Deletion 12 LOC_Os07g34390 ankyrin repeat family protein, putative, expressed FN1336-S Chr7 21720266 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr7 23535446 23535464 0 0 Deletion 18 LOC_Os07g39300 expressed protein FN1336-S Chr7 24120893 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr7 2882539 2882544 0 0 Deletion 5 LOC_Os07g05950 expressed protein FN1336-S Chr7 9300138 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1336-S Chr8 14589544 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr8 17509635 17509636 0 0 Deletion 1 FN1336-S Chr8 23501980 23501981 0 0 Deletion 1 FN1336-S Chr9 10155002 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g16540 protein kinase, putative, expressed FN1336-S Chr9 10274463 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr9 13068266 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr9 20008035 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1336-S Chr9 2517869 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1336-S Chr9 5836589 T-G 0 0 Single Base Substitution 0 INTERGENIC HET