FN1346-S Chr1 10399892 10399894 0 0 Deletion 2 FN1346-S Chr1 13204505 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr1 17176795 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr1 2223380 2223380 0 0 Insertion 2 FN1346-S Chr1 26346272 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr1 31035174 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr1 33985511 33985517 0 0 Deletion 6 FN1346-S Chr1 40014515 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr1 41489665 41489674 0 0 Deletion 9 LOC_Os01g71620 expressed protein FN1346-S Chr10 11156211 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g21730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1346-S Chr10 11209388 11209389 0 0 Deletion 1 FN1346-S Chr10 11533565 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g22300 resistance protein, putative, expressed FN1346-S Chr10 13193016 13193025 0 0 Deletion 9 FN1346-S Chr10 16566224 Chr3 18966064 0 Translocation 0 LOC_Os10g31610 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr10 16566232 16604229 0 0 Inversion 37997 LOC_Os10g31610 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr10 16566233 Chr7 7720283 0 Translocation 0 LOC_Os07g13460 expressed protein FN1346-S Chr10 16566233 Chr7 7720283 0 Translocation 0 LOC_Os10g31610 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr10 16566268 16597330 0 0 Inversion 31062 LOC_Os10g31610 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr10 16597281 Chr3 18965819 0 Translocation 0 FN1346-S Chr10 16597293 Chr1 40134376 0 Translocation 0 LOC_Os01g69060 hydrolase, alpha/beta fold family domain containing protein, expressed FN1346-S Chr10 16599230 Chr1 40134368 0 Translocation 0 LOC_Os01g69060 hydrolase, alpha/beta fold family domain containing protein, expressed FN1346-S Chr10 16604229 Chr7 7719962 0 Translocation 0 LOC_Os07g13460 expressed protein FN1346-S Chr10 16604290 Chr3 18176931 0 Translocation 0 FN1346-S Chr10 17584391 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr10 18025807 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr10 3078136 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr10 3078137 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr11 10367644 C-A 0 0 Single Base Substitution 0 INTRON HET FN1346-S Chr11 15325900 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr11 27475952 27475952 0 0 Insertion 9 FN1346-S Chr11 4512967 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g08542 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr11 8202774 8202777 0 0 Deletion 3 FN1346-S Chr11 8789587 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr11 9221500 9257470 0 0 Inversion 35970 FN1346-S Chr12 15832407 15832408 0 0 Deletion 1 FN1346-S Chr12 26806715 A-G 0 0 Single Base Substitution 0 START_GAINED HOMO LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1346-S Chr12 7285331 7285333 0 0 Deletion 2 FN1346-S Chr2 13946704 13946709 0 0 Deletion 5 FN1346-S Chr2 28203092 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr2 30684814 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr3 14955497 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1346-S Chr3 15810631 15810631 0 0 Insertion 1 FN1346-S Chr3 16214150 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr3 18660677 18792485 0 0 Inversion 131808 LOC_Os03g32850 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr3 18791950 18966068 0 0 Inversion 174118 LOC_Os03g32850 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr3 19371419 19371422 0 0 Deletion 3 FN1346-S Chr3 21529231 21529243 0 0 Deletion 12 LOC_Os03g38764 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr3 24360039 24360045 0 0 Deletion 6 FN1346-S Chr3 24360046 24360052 0 0 Deletion 6 FN1346-S Chr3 29607353 29607369 0 0 Deletion 16 FN1346-S Chr3 34355514 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr3 4451288 4451289 0 0 Deletion 1 FN1346-S Chr4 11051361 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr4 13786619 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr4 16291054 16291065 0 0 Deletion 11 FN1346-S Chr4 18195538 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr4 2069070 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr4 31218747 31218752 0 0 Deletion 5 LOC_Os04g52500 lecithine cholesterol acyltransferase, putative, expressed FN1346-S Chr4 33299645 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr4 6010017 6010038 0 0 Deletion 21 FN1346-S Chr4 6011224 6011224 0 0 Insertion 1 FN1346-S Chr4 8472658 8472664 0 0 Deletion 6 FN1346-S Chr5 12322506 G-A 0 0 Single Base Substitution 0 INTRON HET FN1346-S Chr5 1783468 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr5 23727165 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr5 6514541 6514541 0 0 Insertion 1 FN1346-S Chr5 9310042 9310043 0 0 Deletion 1 FN1346-S Chr6 13500136 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g23140 copper methylamine oxidase precursor, putative, expressed FN1346-S Chr6 22487423 22520999 0 0 Inversion 33576 FN1346-S Chr6 26741817 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1346-S Chr6 26741818 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g44300 WAX2, putative, expressed FN1346-S Chr6 26741819 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g44300 WAX2, putative, expressed FN1346-S Chr6 26770735 26770736 0 0 Deletion 1 FN1346-S Chr6 3255931 3255931 0 0 Insertion 2 FN1346-S Chr6 3964982 3964982 0 0 Insertion 1 FN1346-S Chr6 5628264 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr6 5831383 T-C 0 0 Single Base Substitution 0 INTRON HET FN1346-S Chr6 587684 587690 0 0 Deletion 6 LOC_Os06g02028 eyes absent homolog 4, putative, expressed FN1346-S Chr7 10886937 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1346-S Chr7 10896277 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr7 10896279 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr7 10896280 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr7 12479344 12479355 0 0 Deletion 11 FN1346-S Chr7 12692413 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g22550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1346-S Chr7 1839777 1839780 0 0 Deletion 3 FN1346-S Chr7 4984621 4984622 0 0 Deletion 1 FN1346-S Chr7 5509583 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN1346-S Chr8 16106832 C-A 0 0 Single Base Substitution 0 INTRON HET FN1346-S Chr8 17492739 17492739 0 0 Insertion 6 LOC_Os08g28630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1346-S Chr8 20131861 20131861 0 0 Insertion 2 FN1346-S Chr8 23511755 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr8 2359600 2359606 0 0 Deletion 6 LOC_Os08g04730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1346-S Chr8 24785657 Chr3 18176907 0 Translocation 0 LOC_Os08g39240 OsWAK76 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed FN1346-S Chr8 24785942 Chr3 18176815 0 Translocation 0 LOC_Os08g39240 OsWAK76 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43620 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43630 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43640 26S proteasome non-ATPase regulatory subunit 3, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43654 MATE efflux family protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43670 RING-H2 finger protein ATL2B, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43680 glutathione S-transferase, C-terminal domain containing protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43690 transporter, monovalent cation:proton antiporter-2 family, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43700 OsSAUR36 - Auxin-responsive SAUR gene family member, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43710 transposon protein, putative, unclassified, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43730 DUF630/DUF632 domains containing protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43740 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43750 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43760 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43770 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43780 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43790 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43800 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43810 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43815 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43840 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43850 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43860 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43870 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43880 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43890 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43900 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43910 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43920 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43930 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43940 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43950 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43960 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43970 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g43980 carrier, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44000 uncharacterized protein ycf39, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44010 WD domain, G-beta repeat domain containing protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44015 growth regulator related protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44020 rhamnogalacturonate lyase, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44030 hypothetical protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44040 rhamnogalacturonate lyase, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44050 ZOS8-12 - C2H2 zinc finger protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44060 hypothetical protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44070 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44080 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44110 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44124 retrotransposon protein, putative, unclassified, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44150 transmembrane 9 superfamily member, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44160 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44170 transposon protein, putative, unclassified, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44180 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44190 ZOS8-13 - C2H2 zinc finger protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44200 ECT5, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44210 dihydroneopterin aldolase, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44220 GLTP domain containing protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44230 zinc finger family protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44240 AAA-type ATPase family protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44250 fiber protein Fb14, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44260 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44270 vignain precursor, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44280 protein-L-isoaspartate O-methyltransferase, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44290 RNA recognition motif containing protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44310 expressed protein FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44320 low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44330 peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44340 monodehydroascorbate reductase, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44350 histidine-containing phosphotransfer protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44360 male sterility protein 2, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44370 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44380 L1P family of ribosomal proteins domain containing protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44390 EF hand family protein, putative, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44400 glutathione S-transferase, N-terminal domain containing protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44410 harpin-induced protein 1 domain containing protein, expressed FN1346-S Chr8 27580634 27953391 0 0 Deletion 372757 LOC_Os08g44420 kinesin-related protein, putative, expressed FN1346-S Chr8 3106241 3106246 0 0 Deletion 5 FN1346-S Chr9 13068635 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr9 13585154 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1346-S Chr9 15701942 15701942 0 0 Insertion 2 FN1346-S Chr9 18385450 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1346-S Chr9 18460070 18460070 0 0 Insertion 1 FN1346-S Chr9 20593474 20593478 0 0 Deletion 4 LOC_Os09g35790 HSF-type DNA-binding domain containing protein, expressed