FN1355-S Chr1 10089136 10089141 0 0 Deletion 5 LOC_Os01g18030 retrotransposon protein, putative, unclassified, expressed FN1355-S Chr1 1221493 1221505 0 0 Deletion 12 FN1355-S Chr1 14091827 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr1 23395549 23395553 0 0 Deletion 4 FN1355-S Chr1 26255725 26255727 0 0 Deletion 2 FN1355-S Chr1 26635361 26635377 0 0 Deletion 16 FN1355-S Chr1 27168430 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr1 330104 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr1 36203292 36224913 0 0 Deletion 21621 LOC_Os01g62520 retrotransposon protein, putative, unclassified FN1355-S Chr1 36203292 36224913 0 0 Deletion 21621 LOC_Os01g62530 expressed protein FN1355-S Chr1 36203292 36224913 0 0 Deletion 21621 LOC_Os01g62540 expressed protein FN1355-S Chr1 36203292 36224913 0 0 Deletion 21621 LOC_Os01g62550 expressed protein FN1355-S Chr1 36203292 36224913 0 0 Deletion 21621 LOC_Os01g62560 expressed protein FN1355-S Chr1 36203292 36224913 0 0 Deletion 21621 LOC_Os01g62570 ATP/GTP/Ca++ binding protein, putative, expressed FN1355-S Chr1 4193843 4193844 0 0 Deletion 1 FN1355-S Chr1 42405620 42405624 0 0 Deletion 4 FN1355-S Chr10 1275326 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1355-S Chr10 15738749 15738758 0 0 Deletion 9 FN1355-S Chr10 17713395 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1355-S Chr10 7788104 7788111 0 0 Deletion 7 FN1355-S Chr11 23133377 23187455 0 0 Inversion 54078 LOC_Os11g38860 methyltransferase, putative, expressed FN1355-S Chr11 23133377 23187455 0 0 Inversion 54078 LOC_Os11g38959 40S ribosomal protein S9-2, putative, expressed FN1355-S Chr11 23133391 23187460 0 0 Inversion 54069 LOC_Os11g38860 methyltransferase, putative, expressed FN1355-S Chr11 23133391 23187460 0 0 Inversion 54069 LOC_Os11g38959 40S ribosomal protein S9-2, putative, expressed FN1355-S Chr11 23163939 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1355-S Chr11 23163943 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1355-S Chr11 23219995 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr11 25607159 25607166 0 0 Deletion 7 FN1355-S Chr12 8106970 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr2 11662984 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr2 18958688 18958691 0 0 Deletion 3 FN1355-S Chr2 19219927 19219927 0 0 Insertion 4 FN1355-S Chr2 23497814 23497821 0 0 Deletion 7 FN1355-S Chr2 29669388 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g48450 xylem cysteine proteinase 2 precursor, putative, expressed FN1355-S Chr2 29669389 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1355-S Chr2 35138460 35138472 0 0 Deletion 12 FN1355-S Chr3 11680789 11680790 0 0 Deletion 1 FN1355-S Chr3 25491824 25491833 0 0 Deletion 9 FN1355-S Chr3 31092324 31092325 0 0 Deletion 1 FN1355-S Chr3 31289274 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr3 34352986 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1355-S Chr3 7742486 T-G 0 0 Single Base Substitution 0 INTRON HET FN1355-S Chr3 8719689 8719701 0 0 Deletion 12 LOC_Os03g15800 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed FN1355-S Chr4 14317018 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1355-S Chr4 16271157 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1355-S Chr4 21034841 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr4 21255083 21255083 0 0 Insertion 1 FN1355-S Chr4 22480475 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr4 6681662 6681668 0 0 Deletion 6 LOC_Os04g12130 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1355-S Chr4 7221917 A-C 0 0 Single Base Substitution 0 INTRON HET FN1355-S Chr5 20092537 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr5 20287235 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr5 22345924 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1355-S Chr5 28359977 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1355-S Chr5 28859504 28859524 0 0 Deletion 20 FN1355-S Chr5 4248808 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr5 8136782 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr5 8136783 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr6 11081380 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr6 11427970 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr6 12672722 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr6 15968119 15968129 0 0 Deletion 10 FN1355-S Chr6 17652576 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr6 28604747 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed FN1355-S Chr6 29424944 G-A 0 0 Single Base Substitution 0 INTRON HET FN1355-S Chr6 9566764 A-C 0 0 Single Base Substitution 0 INTRON HET FN1355-S Chr6 9595113 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr7 10940748 10940754 0 0 Deletion 6 FN1355-S Chr7 11774289 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr7 14182528 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr7 14694096 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g25630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1355-S Chr7 21859417 21859430 0 0 Deletion 13 FN1355-S Chr7 27264025 27264032 0 0 Deletion 7 LOC_Os07g45660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1355-S Chr7 3265457 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN1355-S Chr7 8437178 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1355-S Chr8 18837954 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1355-S Chr8 19537991 19538030 0 0 Deletion 39 FN1355-S Chr8 3337774 3337785 0 0 Deletion 11 LOC_Os08g06100 O-methyltransferase, putative, expressed FN1355-S Chr8 4111094 4111101 0 0 Deletion 7 FN1355-S Chr9 10746726 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g17570 expressed protein FN1355-S Chr9 10746727 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g17570 expressed protein FN1355-S Chr9 13805119 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN1355-S Chr9 407376 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1355-S Chr9 7847293 C-T 0 0 Single Base Substitution 0 INTERGENIC HET