FN1356-S Chr1 22338833 22338840 0 0 Deletion 7 LOC_Os01g39600 expressed protein FN1356-S Chr1 27436170 27436171 0 0 Deletion 1 FN1356-S Chr1 29017075 29017077 0 0 Deletion 2 FN1356-S Chr1 33942755 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g58710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1356-S Chr1 6083720 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr10 11176687 11176713 0 0 Deletion 26 LOC_Os10g21784 expressed protein FN1356-S Chr10 12213495 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr10 17833880 17833881 0 0 Deletion 1 FN1356-S Chr10 3552546 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1356-S Chr10 936539 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr11 11177215 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g19430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1356-S Chr11 1467932 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr11 16450642 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr11 8590837 8590838 0 0 Deletion 1 LOC_Os11g15220 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr11 8940005 G-C 0 0 Single Base Substitution 0 INTRON HET FN1356-S Chr11 9489738 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr12 1357263 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr12 16523856 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr12 25907397 T-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1356-S Chr12 4813514 4813520 0 0 Deletion 6 FN1356-S Chr12 908036 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed FN1356-S Chr12 9957165 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1356-S Chr2 12353499 12353499 0 0 Insertion 4 FN1356-S Chr2 14047343 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr2 14745077 14745097 0 0 Deletion 20 FN1356-S Chr2 17444360 17444362 0 0 Deletion 2 FN1356-S Chr2 17447746 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1356-S Chr2 20810914 20810915 0 0 Deletion 1 FN1356-S Chr2 20905063 A-T 0 0 Single Base Substitution 0 INTRON HET FN1356-S Chr2 34566539 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr2 9343768 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr3 23234876 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1356-S Chr3 2791609 2791617 0 0 Deletion 8 FN1356-S Chr3 6487413 G-A 0 0 Single Base Substitution 0 INTRON HET FN1356-S Chr4 21432993 T-A 0 0 Single Base Substitution 0 INTRON HET FN1356-S Chr4 24064704 24064711 0 0 Deletion 7 FN1356-S Chr4 28905878 28905954 0 0 Deletion 76 FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57130 dirigent-like protein pDIR17, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57140 kinesin motor domain containing protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57150 tafazzin, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57154 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57160 flavonol synthase/flavanone 3-hydroxylase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57170 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57180 flavonol synthase/flavanone 3-hydroxylase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57190 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57200 heavy metal transport/detoxification protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57210 actin-6, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57220 ubiquitin-conjugating enzyme, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57230 regulatory protein RecX family protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57240 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57250 latency associated nuclear antigen, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57260 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57270 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57280 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57290 OsFBX153 - F-box domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57300 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57310 thiol-disulphide oxidoreductase DCC, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57320 immutans protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57330 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57340 AP2 domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57350 EH domain-containing protein 1, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57360 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57370 acyl-protein thioesterase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57380 acyl-protein thioesterase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57390 acyl-protein thioesterase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57400 methylthioribose kinase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57410 methylthioribose kinase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57420 reticulon domain containing protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57430 uncharacterized protein At4g06744 precursor, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57440 oryzain beta chain precursor, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57450 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57460 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57470 retrotransposon protein, putative, unclassified FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57480 OTU-like cysteine protease family protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57490 cysteine protease, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57500 phosphatidate cytidylyltransferase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57510 exostosin family domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57520 UBX domain-containing protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57530 transcription factor, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57540 adenylate kinase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57550 amine oxidase, flavin-containing, domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57560 amine oxidase, flavin-containing, domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57570 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57580 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57590 DJ-1 family protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57610 auxin response factor, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57620 hypothetical protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57630 phytosulfokine receptor precursor, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57640 RCD1, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57650 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57660 phytosulfokine receptor precursor, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57670 pentatricopeptide, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57680 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57690 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57700 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57710 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57720 OsRR6 type-A response regulator, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57730 uracil-DNA glycosylase, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57739 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57750 plastocyanin-like domain containing protein, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57760 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57770 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57780 tetratricopeptide repeat domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57790 ubiquinone biosynthesis protein COQ4, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57800 BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57804 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57810 GA18008-PA, putative, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57819 DHHC zinc finger domain containing protein, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57830 expressed protein FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57840 transposon protein, putative, unclassified, expressed FN1356-S Chr4 34035001 34449000 0 0 Deletion 414000 LOC_Os04g57850 AMP-binding enzyme, putative, expressed FN1356-S Chr4 35413579 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g59540 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed FN1356-S Chr5 11682824 11682827 0 0 Deletion 3 FN1356-S Chr5 16266780 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr5 25818940 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1356-S Chr5 28034317 28034317 0 0 Insertion 1 FN1356-S Chr5 29714518 29714519 0 0 Deletion 1 FN1356-S Chr5 4198936 A-T 0 0 Single Base Substitution 0 INTRON HET FN1356-S Chr5 8010345 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr5 9708262 9708263 0 0 Deletion 1 LOC_Os05g17010 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr6 11722094 11722096 0 0 Deletion 2 FN1356-S Chr6 19331820 19331820 0 0 Insertion 1 FN1356-S Chr6 25502553 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr6 26230836 26230837 0 0 Deletion 1 FN1356-S Chr6 30011258 30011258 0 0 Insertion 1 FN1356-S Chr6 8511332 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15020 3-ketoacyl-CoA synthase, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26520 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26530 hypothetical protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26540 hexokinase, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26550 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26560 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26570 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26590 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26595 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26600 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26610 phosphoglucomutase, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26630 aquaporin protein, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26640 aquaporin protein, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26650 hypothetical protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26660 aquaporin protein, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26670 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26690 aquaporin protein, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26700 UPF0041 domain containing protein, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26710 hypothetical protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26720 OsRR7 type-A response regulator, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26730 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26740 60S ribosomal protein L44, putative, expressed FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26750 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26760 expressed protein FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26770 circumsporozoite protein precursor, putative FN1356-S Chr7 15280001 15468000 0 0 Deletion 188000 LOC_Os07g26780 retrotransposon protein, putative, unclassified, expressed FN1356-S Chr7 17505771 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN1356-S Chr7 9425931 9425933 0 0 Deletion 2 FN1356-S Chr8 10678210 10678210 0 0 Insertion 2 FN1356-S Chr8 12846378 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1356-S Chr8 14418919 Chr5 7756314 0 Translocation 0 LOC_Os08g23810 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed FN1356-S Chr8 16181067 16529392 0 0 Inversion 348325 LOC_Os08g26590 hypothetical protein FN1356-S Chr8 16181067 16529392 0 0 Inversion 348325 LOC_Os08g27050 expressed protein FN1356-S Chr8 16701441 16701441 0 0 Insertion 2 FN1356-S Chr8 21353329 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1356-S Chr9 17389897 17389903 0 0 Deletion 6 FN1356-S Chr9 20149350 Chr8 14418941 0 Translocation 0 LOC_Os08g23810 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed FN1356-S Chr9 20149350 Chr8 14418941 0 Translocation 0 LOC_Os09g34130 GRAM domain containing protein, expressed FN1356-S Chr9 20150467 Chr5 7787136 0 Translocation 0 LOC_Os09g34130 GRAM domain containing protein, expressed FN1356-S Chr9 22440522 22440528 0 0 Deletion 6 FN1356-S Chr9 6495531 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g11630 retrotransposon protein, putative, unclassified, expressed