FN1380-S Chr1 11711250 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr1 14145356 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr1 16199903 16199910 0 0 Deletion 7 FN1380-S Chr1 17469178 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr1 2126064 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr1 22780000 22780010 0 0 Deletion 10 LOC_Os01g40340 SIT4 phosphatase-associated protein domain containing protein, expressed FN1380-S Chr1 39331322 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr1 5129314 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr10 158670 Chr2 19267938 0 Translocation 0 FN1380-S Chr10 17340409 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr10 22824430 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr10 539336 539337 0 0 Deletion 1 FN1380-S Chr11 4363574 4363583 0 0 Deletion 9 FN1380-S Chr12 12606164 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN1380-S Chr12 22679847 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g37000 retrotransposon protein, putative, unclassified FN1380-S Chr12 23137317 23137319 0 0 Deletion 2 LOC_Os12g37690 MYB family transcription factor, putative, expressed FN1380-S Chr12 23789037 23789038 0 0 Deletion 1 FN1380-S Chr12 24480421 24480458 0 0 Deletion 37 LOC_Os12g39650 tubulin, putative, expressed FN1380-S Chr12 26170428 26170443 0 0 Deletion 15 FN1380-S Chr12 26330745 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g42360 expressed protein FN1380-S Chr12 26966859 26966868 0 0 Deletion 9 FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10820 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10830 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10840 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10850 hhH-GPD superfamily base excision DNA repair protein, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10870 verticillium wilt disease resistance protein, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10880 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10890 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10900 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10910 A/G-specific adenine DNA glycosylase, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10920 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10930 NL0E, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10940 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10950 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10960 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10970 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10980 circumsporozoite protein precursor, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g10990 transposon protein, putative, CACTA, En/Spm sub-class FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11000 transposon protein, putative, CACTA, En/Spm sub-class FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11010 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11020 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11030 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11040 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11050 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11060 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11070 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11090 retrotransposon protein, putative, Ty3-gypsy subclass FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11130 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11140 retrotransposon protein, putative, Ty3-gypsy subclass FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11160 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11180 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11190 retrotransposon protein, putative, Ty3-gypsy subclass FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11210 transposon protein, putative, CACTA, En/Spm sub-class FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11220 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11240 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11250 transposon protein, putative, CACTA, En/Spm sub-class FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11270 retrotransposon protein, putative, Ty3-gypsy subclass FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11280 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11300 retrotransposon protein, putative, Ty3-gypsy subclass FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11330 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11340 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11360 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11370 verticillium wilt disease resistance protein, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11380 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11400 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11410 retrotransposon protein, putative, LINE subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11420 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11430 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11440 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11450 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11460 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11470 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11480 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11490 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11500 resistance protein SlVe1 precursor, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11510 hcr2-0B, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11520 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11530 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11550 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11560 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11580 transposon protein, putative, CACTA, En/Spm sub-class FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11590 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11610 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11620 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11630 transposon protein, putative, CACTA, En/Spm sub-class FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11640 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11650 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11660 RALFL45 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11670 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11680 verticillium wilt disease resistance protein precursor, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11690 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11700 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11710 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11720 verticillium wilt disease resistance protein precursor, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11740 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11750 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11760 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11770 retrotransposon protein, putative, unclassified FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11790 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11800 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11830 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11840 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11860 verticillium wilt disease resistance protein precursor, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11870 expressed protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11880 hypothetical protein FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11890 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11900 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11930 disease resistance protein SlVe2 precursor, putative, expressed FN1380-S Chr12 5825001 6520000 0 0 Deletion 695000 LOC_Os12g11940 disease resistance family protein, putative, expressed FN1380-S Chr2 13382286 13382296 0 0 Deletion 10 FN1380-S Chr2 2267527 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g04910 transposon protein, putative, unclassified, expressed FN1380-S Chr2 29554654 29554654 0 0 Insertion 2 FN1380-S Chr2 29675101 29675110 0 0 Deletion 9 FN1380-S Chr2 30075839 30075840 0 0 Deletion 1 FN1380-S Chr2 31355956 31355956 0 0 Insertion 1 FN1380-S Chr2 3407528 3407529 0 0 Deletion 1 FN1380-S Chr2 6204765 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr3 11276333 11276336 0 0 Deletion 3 FN1380-S Chr3 11495646 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr3 1573812 1573858 0 0 Deletion 46 FN1380-S Chr3 25976828 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr3 35284160 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1380-S Chr3 392506 392520 0 0 Deletion 14 FN1380-S Chr3 6771684 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1380-S Chr4 1626356 T-C 0 0 Single Base Substitution 0 INTRON HET FN1380-S Chr4 19357202 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr4 25581441 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g43230 expressed protein FN1380-S Chr4 25581442 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g43230 expressed protein FN1380-S Chr4 26826213 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr4 28987408 C-T 0 0 Single Base Substitution 0 INTRON HET FN1380-S Chr4 31220489 31220517 0 0 Deletion 28 FN1380-S Chr5 13851288 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr5 14460023 A-G 0 0 Single Base Substitution 0 INTRON HET FN1380-S Chr5 8308517 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr5 9517968 9518046 0 0 Deletion 78 LOC_Os05g16740 SHR5-receptor-like kinase, putative, expressed FN1380-S Chr6 13587004 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1380-S Chr6 18154209 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g31210 methionyl-tRNA synthetase, putative, expressed FN1380-S Chr6 1975847 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1380-S Chr6 25072876 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr6 30179291 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr6 3689469 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1380-S Chr6 6352285 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g11920 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN1380-S Chr6 7017450 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr7 29418479 29418480 0 0 Deletion 1 LOC_Os07g49120 sex determination protein tasselseed-2, putative, expressed FN1380-S Chr7 319501 319516 0 0 Deletion 15 FN1380-S Chr7 4890777 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1380-S Chr8 12728381 G-C 0 0 Single Base Substitution 0 INTRON HET FN1380-S Chr8 21271143 21271157 0 0 Deletion 14 FN1380-S Chr8 25664162 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr8 6835186 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13699 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13710 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13720 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13730 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13740 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13770 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13780 U-box domain-containing protein, putative, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13790 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13795 expressed protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13800 NB-ARC domain containing protein, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13810 retrotransposon protein, putative, unclassified, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13840 WRKY25, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13850 conserved hypothetical protein FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13860 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13870 S-locus lectin protein kinase family protein, putative, expressed FN1380-S Chr8 8160001 8295000 0 0 Deletion 135000 LOC_Os08g13880 expressed protein FN1380-S Chr8 989411 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1380-S Chr9 1033615 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g02490 transposon protein, putative, CACTA, En/Spm sub-class, expressed