FN1392-S Chr1 30654149 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr10 20951101 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr10 21025387 Chr9 13866584 0 Translocation 0 FN1392-S Chr10 21026763 Chr9 13866541 0 Translocation 0 FN1392-S Chr10 21414178 21415812 0 0 Deletion 1634 FN1392-S Chr10 9339915 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr10 9699861 9699865 0 0 Deletion 4 FN1392-S Chr11 11252415 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1392-S Chr11 16142767 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr11 17542950 C-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os11g30170 transposon protein, putative, unclassified, expressed FN1392-S Chr11 2258251 2258252 0 0 Deletion 1 FN1392-S Chr11 26129615 26129615 0 0 Insertion 2 FN1392-S Chr11 8658274 8658274 0 0 Insertion 19 FN1392-S Chr11 9284013 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr12 15910129 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN1392-S Chr12 22091005 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN1392-S Chr12 25437876 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g41080 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1392-S Chr12 3702058 3702059 0 0 Deletion 1 FN1392-S Chr12 8797140 8797142 0 0 Deletion 2 LOC_Os12g15400 CXE carboxylesterase, putative, expressed FN1392-S Chr12 9017320 9017338 0 0 Deletion 18 FN1392-S Chr2 14426795 14426803 0 0 Deletion 8 LOC_Os02g24880 retrotransposon, putative, centromere-specific, expressed FN1392-S Chr2 15973056 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN1392-S Chr2 16104784 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr2 19533017 19533026 0 0 Deletion 9 LOC_Os02g32880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1392-S Chr2 23745222 23745227 0 0 Deletion 5 FN1392-S Chr2 27868540 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr3 12624598 12624598 0 0 Insertion 3 FN1392-S Chr3 23301318 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr4 6703434 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr4 9487972 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr5 14050171 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr5 20012320 Chr4 22380840 0 Translocation 0 FN1392-S Chr5 21765747 21765747 0 0 Insertion 4 FN1392-S Chr5 24823824 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr5 29886601 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN1392-S Chr5 8911579 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr5 9231882 9231883 0 0 Deletion 1 FN1392-S Chr5 9279376 9279387 0 0 Deletion 11 LOC_Os05g16390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1392-S Chr6 10680127 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g18810 expressed protein FN1392-S Chr6 12202200 Chr1 34372952 0 Translocation 0 FN1392-S Chr6 17821097 17821097 0 0 Insertion 1 FN1392-S Chr6 25338047 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed FN1392-S Chr6 28112971 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr6 29771975 T-C 0 0 Single Base Substitution 0 INTRON HET FN1392-S Chr6 30814290 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g50910 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed FN1392-S Chr6 30907354 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1392-S Chr6 792567 792568 0 0 Deletion 1 FN1392-S Chr7 13091737 13098058 0 0 Deletion 6321 LOC_Os07g23220 retrotransposon protein, putative, unclassified, expressed FN1392-S Chr7 13091737 13098058 0 0 Deletion 6321 LOC_Os07g23230 retrotransposon protein, putative, unclassified, expressed FN1392-S Chr7 13092163 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1392-S Chr7 13097240 13097249 0 0 Deletion 9 FN1392-S Chr7 13098052 13130448 0 0 Inversion 32396 FN1392-S Chr7 13123592 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g23290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1392-S Chr7 13128289 13130455 0 0 Inversion 2166 FN1392-S Chr7 14123900 G-A 0 0 Single Base Substitution 0 INTRON HET FN1392-S Chr7 15875161 15875170 0 0 Deletion 9 FN1392-S Chr7 21014561 21027795 0 0 Deletion 13234 LOC_Os07g35080 transposon protein, putative, unclassified FN1392-S Chr7 21014561 21027795 0 0 Deletion 13234 LOC_Os07g35090 transposon protein, putative, unclassified FN1392-S Chr7 21014561 21027795 0 0 Deletion 13234 LOC_Os07g35100 retrotransposon protein, putative, unclassified, expressed FN1392-S Chr7 21420925 21424012 0 0 Deletion 3087 LOC_Os07g35760 expressed protein FN1392-S Chr7 26804921 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr7 26804925 26804933 0 0 Deletion 8 FN1392-S Chr7 29661649 29661649 0 0 Insertion 2 FN1392-S Chr7 548233 548237 0 0 Deletion 4 FN1392-S Chr7 9308924 9357532 0 0 Deletion 48608 LOC_Os07g15980 expressed protein FN1392-S Chr7 9308924 9357532 0 0 Deletion 48608 LOC_Os07g15990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1392-S Chr7 9308924 9357532 0 0 Deletion 48608 LOC_Os07g16000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1392-S Chr7 9308924 9357532 0 0 Deletion 48608 LOC_Os07g16010 retrotransposon protein, putative, Ty3-gypsy subclass FN1392-S Chr7 9308924 9357532 0 0 Deletion 48608 LOC_Os07g16030 expressed protein FN1392-S Chr7 9308924 9357532 0 0 Deletion 48608 LOC_Os07g16040 erythronate-4-phosphate dehydrogenase domain containing protein, expressed FN1392-S Chr8 10171056 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr8 1315703 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1392-S Chr8 13636524 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr8 16927927 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g27790 retrotransposon protein, putative, unclassified, expressed FN1392-S Chr8 17761388 17761397 0 0 Deletion 9 FN1392-S Chr8 17763385 17763389 0 0 Deletion 4 FN1392-S Chr8 3346529 3346532 0 0 Deletion 3 FN1392-S Chr8 6332584 6332586 0 0 Deletion 2 LOC_Os08g10770 retrotransposon protein, putative, unclassified, expressed FN1392-S Chr9 15312757 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1392-S Chr9 4091276 C-T 0 0 Single Base Substitution 0 INTRON HET FN1392-S Chr9 6710705 6710710 0 0 Deletion 5 FN1392-S Chr9 8981681 8981681 0 0 Insertion 2