FN1396-S Chr1 12069711 12069724 0 0 Deletion 13 FN1396-S Chr1 30919748 30919749 0 0 Deletion 1 FN1396-S Chr1 37741034 37741047 0 0 Deletion 13 LOC_Os01g65010 serine/threonine-protein kinase receptor precursor, putative, expressed FN1396-S Chr1 38963262 38963267 0 0 Deletion 5 LOC_Os01g67120 rhodanese-like domain containing protein, putative, expressed FN1396-S Chr10 15582704 A-G 0 0 Single Base Substitution 0 INTRON HET FN1396-S Chr10 21262167 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr10 21963548 21963549 0 0 Deletion 1 FN1396-S Chr10 4825944 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g08920 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr10 9013621 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27799 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27810 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27840 retrotransposon protein, putative, Ty3-gypsy subclass FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27860 retrotransposon protein, putative, Ty3-gypsy subclass FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27880 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27890 retrotransposon protein, putative, Ty3-gypsy subclass FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27900 retrotransposon protein, putative, unclassified FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27930 hypothetical protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27940 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27970 glycine-rich cell wall structural protein 1 precursor, putative, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27980 lipase class 3 family protein, putative, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g27990 hypothetical protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28000 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28010 hypothetical protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28030 transposon protein, putative, CACTA, En/Spm sub-class FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28040 transposon protein, putative, CACTA, En/Spm sub-class FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28060 cytochrome P450, putative, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28065 cytochrome P450 71C1, putative, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28070 retrotransposon protein, putative, unclassified FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28080 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28104 TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28130 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28150 transposon protein, putative, CACTA, En/Spm sub-class FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28170 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28184 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28210 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28220 expressed protein FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28230 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr11 16006001 16238000 0 0 Deletion 232000 LOC_Os11g28240 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr11 24237317 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr11 9412195 9412196 0 0 Deletion 1 FN1396-S Chr12 22945448 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr12 23171758 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN1396-S Chr12 23171764 C-A 0 0 Single Base Substitution 0 START_GAINED HOMO LOC_Os12g37740 resistance protein LR10, putative, expressed FN1396-S Chr12 24168987 24172680 0 0 Deletion 3693 LOC_Os12g39270 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr12 5009800 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr2 10138390 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN1396-S Chr2 16963631 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN1396-S Chr2 24179472 24179472 0 0 Insertion 2 FN1396-S Chr2 6351478 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr3 11727713 11727740 0 0 Deletion 27 LOC_Os03g20720 GTPase-activating protein, putative, expressed FN1396-S Chr3 11759595 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr3 14413091 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr3 19027930 19027931 0 0 Deletion 1 LOC_Os03g33260 retrotransposon protein, putative, unclassified, expressed FN1396-S Chr3 31832364 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr3 32604039 32604039 0 0 Insertion 1 FN1396-S Chr3 4438084 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1396-S Chr3 7129959 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN1396-S Chr4 12634400 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN1396-S Chr4 20595955 20596005 0 0 Deletion 50 LOC_Os04g34010 aluminum-activated malate transporter, putative, expressed FN1396-S Chr4 24776284 24776292 0 0 Deletion 8 FN1396-S Chr4 26833439 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr4 26833440 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr4 30765500 30765501 0 0 Deletion 1 FN1396-S Chr4 4587864 4587865 0 0 Deletion 1 FN1396-S Chr4 8995382 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g16540 retrotransposon protein, putative, Ty3-gypsy subclass FN1396-S Chr5 1965199 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr5 24448941 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr5 24867098 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr5 26767558 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1396-S Chr6 17470688 17470688 0 0 Insertion 1 FN1396-S Chr6 24126824 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr6 28679223 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr7 11715943 11715944 0 0 Deletion 1 FN1396-S Chr7 12458671 13590616 0 0 Inversion 1131945 LOC_Os07g23990 tetratricopeptide repeat domain containing protein, putative, expressed FN1396-S Chr7 13590612 14504522 0 0 Inversion 913910 LOC_Os07g23990 tetratricopeptide repeat domain containing protein, putative, expressed FN1396-S Chr7 14504524 14637515 0 0 Inversion 132991 FN1396-S Chr7 15975191 15975193 0 0 Deletion 2 FN1396-S Chr7 16131043 16131044 0 0 Deletion 1 LOC_Os07g27620 hypothetical protein FN1396-S Chr7 22650391 24289584 0 0 Inversion 1639193 LOC_Os07g37760 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed FN1396-S Chr7 8984896 8984897 0 0 Deletion 1 FN1396-S Chr8 10886879 11877122 0 0 Inversion 990243 LOC_Os08g19830 ubiquitin family protein, putative, expressed FN1396-S Chr8 10886899 11877123 0 0 Inversion 990224 LOC_Os08g19830 ubiquitin family protein, putative, expressed FN1396-S Chr8 1544448 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g03330 expressed protein FN1396-S Chr8 26442291 26442291 0 0 Insertion 2 FN1396-S Chr9 21159465 21159465 0 0 Insertion 2 FN1396-S Chr9 3175326 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr9 5862020 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1396-S Chr9 6281814 Chr3 31100519 0 Translocation 0 FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13340 transposon protein, putative, CACTA, En/Spm sub-class FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13370 transposon protein, putative, CACTA, En/Spm sub-class FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13380 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13390 expressed protein FN1396-S Chr9 7696001 7744000 0 0 Deletion 48000 LOC_Os09g13400 expressed protein