FN1400-S Chr1 12753756 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr1 14652985 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g25839 retrotransposon protein, putative, Ty1-copia subclass FN1400-S Chr1 22945262 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr1 25460751 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr1 25460758 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr1 26127094 26127095 0 0 Deletion 1 FN1400-S Chr1 9878278 9878278 0 0 Insertion 2 FN1400-S Chr10 12047264 12047267 0 0 Deletion 3 FN1400-S Chr10 12526997 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1400-S Chr10 13397231 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN1400-S Chr10 16911998 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr10 19612987 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1400-S Chr10 21251563 21251564 0 0 Deletion 1 FN1400-S Chr10 6305049 7429675 0 0 Inversion 1124626 LOC_Os10g11370 LTPL87 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN1400-S Chr10 6305049 7429675 0 0 Inversion 1124626 LOC_Os10g13690 retrotransposon protein, putative, unclassified, expressed FN1400-S Chr11 11101116 11101116 0 0 Insertion 7 FN1400-S Chr11 20818481 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr11 3326429 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr11 8353401 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr12 13182091 13182123 0 0 Deletion 32 FN1400-S Chr12 16074869 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1400-S Chr12 16074874 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g27340 expressed protein FN1400-S Chr12 16420866 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr12 17835352 17835352 0 0 Insertion 4 FN1400-S Chr12 20934095 Chr2 10798325 0 Translocation 0 FN1400-S Chr12 6536098 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr2 14449446 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr2 27589543 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr2 30794328 A-G 0 0 Single Base Substitution 0 INTRON HET FN1400-S Chr2 30839721 30839722 0 0 Deletion 1 LOC_Os02g50490 endoglucanase, putative, expressed FN1400-S Chr2 32190580 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr2 32968024 32968031 0 0 Deletion 7 LOC_Os02g53830 MTD1, putative, expressed FN1400-S Chr2 33515246 33515256 0 0 Deletion 10 FN1400-S Chr2 34808416 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr3 11477093 11477096 0 0 Deletion 3 LOC_Os03g20310 transcription factor HBP-1b, putative, expressed FN1400-S Chr3 15958139 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr3 15958140 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr3 21730994 21730999 0 0 Deletion 5 LOC_Os03g39110 expressed protein FN1400-S Chr3 9511106 9511110 0 0 Deletion 4 FN1400-S Chr4 27529271 27529272 0 0 Deletion 1 FN1400-S Chr4 8776736 8776739 0 0 Deletion 3 FN1400-S Chr5 1177094 1177126 0 0 Deletion 32 FN1400-S Chr5 15261862 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g26230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1400-S Chr5 16122380 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr5 3640669 3640669 0 0 Insertion 2 FN1400-S Chr7 13483217 C-T 0 0 Single Base Substitution 0 INTRON HET FN1400-S Chr7 487132 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr8 12601291 12601683 0 0 Deletion 392 FN1400-S Chr8 12601296 Chr3 35468154 0 Translocation 0 LOC_Os03g62670 expressed protein FN1400-S Chr8 15214874 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr8 15522332 15522354 0 0 Deletion 22 FN1400-S Chr8 15552590 15552972 0 0 Deletion 382 FN1400-S Chr8 15560782 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr8 15560784 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1400-S Chr8 22266392 22266393 0 0 Deletion 1 FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35520 retrotransposon protein, putative, unclassified, expressed FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35530 retrotransposon protein, putative, unclassified FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35540 retrotransposon protein, putative, unclassified, expressed FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35550 hypothetical protein FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35560 expressed protein FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35570 expressed protein FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35580 expressed protein FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35590 expressed protein FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35600 tyrosine protein kinase domain containing protein, putative, expressed FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35610 retrotransposon protein, putative, unclassified, expressed FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35620 HD domain containing protein, putative, expressed FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35630 MTD1, putative, expressed FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35640 hypothetical protein FN1400-S Chr8 22376001 22483000 0 0 Deletion 107000 LOC_Os08g35650 expressed protein FN1400-S Chr9 17071614 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1400-S Chr9 2724821 2724821 0 0 Insertion 2 FN1400-S Chr9 4539311 Chr8 15552597 0 Translocation 0 LOC_Os09g08660 4-nitrophenylphosphatase, putative, expressed