FN1415-S Chr1 16897198 16897200 0 0 Deletion 2 FN1415-S Chr1 19778646 19778657 0 0 Deletion 11 LOC_Os01g35720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1415-S Chr1 20422547 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr1 22766710 22766711 0 0 Deletion 1 FN1415-S Chr1 26367126 26367128 0 0 Deletion 2 FN1415-S Chr1 29019542 29019542 0 0 Insertion 76 FN1415-S Chr1 39154827 39154828 0 0 Deletion 1 FN1415-S Chr1 40790248 40790248 0 0 Insertion 2 LOC_Os01g70410 protein kinase, putative, expressed FN1415-S Chr1 6054750 6054754 0 0 Deletion 4 FN1415-S Chr1 6334252 6334277 0 0 Deletion 25 FN1415-S Chr10 1285812 T-C 0 0 Single Base Substitution 0 INTRON HET FN1415-S Chr10 14481234 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr10 15569750 15569751 0 0 Deletion 1 FN1415-S Chr10 7747917 7747918 0 0 Deletion 1 FN1415-S Chr11 1045396 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr11 12280718 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr11 17623229 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr11 25217197 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr11 5625835 5625850 0 0 Deletion 15 FN1415-S Chr12 12683518 12683519 0 0 Deletion 1 LOC_Os12g22470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1415-S Chr12 13712338 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr12 14356011 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g25000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1415-S Chr12 17132980 17132981 0 0 Deletion 1 FN1415-S Chr12 17301843 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr12 19010416 19010417 0 0 Deletion 1 FN1415-S Chr12 20102858 22331748 0 0 Inversion 2228890 LOC_Os12g33230 OsFBL60 - F-box domain and LRR containing protein, expressed FN1415-S Chr12 20102858 22331748 0 0 Inversion 2228890 LOC_Os12g36490 expressed protein FN1415-S Chr12 21044537 Chr2 32017783 0 Translocation 0 LOC_Os02g52290 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN1415-S Chr12 21044923 Chr2 32017735 0 Translocation 0 LOC_Os02g52290 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN1415-S Chr12 21403257 21549770 0 0 Inversion 146513 FN1415-S Chr12 21615852 22331744 0 0 Inversion 715892 LOC_Os12g35550 expressed protein FN1415-S Chr12 21615852 22331744 0 0 Inversion 715892 LOC_Os12g36490 expressed protein FN1415-S Chr12 27468730 27468732 0 0 Deletion 2 FN1415-S Chr12 3397249 T-C 0 0 Single Base Substitution 0 INTRON HET FN1415-S Chr12 4645321 4645323 0 0 Deletion 2 FN1415-S Chr12 6140844 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g11370 verticillium wilt disease resistance protein, putative, expressed FN1415-S Chr12 7524508 A-G 0 0 Single Base Substitution 0 INTRON HET FN1415-S Chr12 7524574 G-C 0 0 Single Base Substitution 0 INTRON HET FN1415-S Chr12 9855874 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr2 10187609 10187609 0 0 Insertion 6 FN1415-S Chr2 10913985 10913992 0 0 Deletion 7 LOC_Os02g18700 ABC transporter family protein, putative, expressed FN1415-S Chr2 25257568 25257575 0 0 Deletion 7 FN1415-S Chr2 29789167 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g48640 expressed protein FN1415-S Chr2 29898158 29898160 0 0 Deletion 2 FN1415-S Chr2 32158193 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr2 32177302 32177306 0 0 Deletion 4 FN1415-S Chr2 4235971 4235985 0 0 Deletion 14 FN1415-S Chr2 4621860 4621862 0 0 Deletion 2 LOC_Os02g08540 expressed protein FN1415-S Chr2 5300373 A-G 0 0 Single Base Substitution 0 INTRON Homo FN1415-S Chr2 6580531 6580531 0 0 Insertion 16 FN1415-S Chr3 12782623 C-T 0 0 Single Base Substitution 0 INTRON HET FN1415-S Chr3 18053453 18053454 0 0 Deletion 1 LOC_Os03g31630 OsSub29 - Putative Subtilisin homologue, expressed FN1415-S Chr3 19832643 19832644 0 0 Deletion 1 FN1415-S Chr3 23252003 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr3 23484289 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr3 31836811 31836815 0 0 Deletion 4 FN1415-S Chr3 33281250 33281251 0 0 Deletion 1 FN1415-S Chr3 750758 750761 0 0 Deletion 3 FN1415-S Chr4 10818616 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr4 12161090 12161133 0 0 Deletion 43 FN1415-S Chr4 14317018 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr4 16632299 16632299 0 0 Insertion 4 FN1415-S Chr4 21274234 21274244 0 0 Deletion 10 FN1415-S Chr4 2166301 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr4 31515142 31515143 0 0 Deletion 1 FN1415-S Chr4 5643847 5643848 0 0 Deletion 1 FN1415-S Chr5 1001443 1001456 0 0 Deletion 13 FN1415-S Chr5 17782229 17782230 0 0 Deletion 1 FN1415-S Chr5 28547688 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g49760 dehydrogenase, putative, expressed FN1415-S Chr5 29017191 29017191 0 0 Insertion 2 FN1415-S Chr5 6265174 6265174 0 0 Insertion 2 FN1415-S Chr6 10437410 10437410 0 0 Insertion 14 FN1415-S Chr6 12706448 12706448 0 0 Insertion 8 FN1415-S Chr6 14343583 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr6 15355251 15355254 0 0 Deletion 3 LOC_Os06g26234 1,4-alpha-glucan-branching enzyme, putative, expressed FN1415-S Chr6 18350838 18350838 0 0 Insertion 1 FN1415-S Chr6 24676741 24676742 0 0 Deletion 1 FN1415-S Chr6 4744950 4744955 0 0 Deletion 5 FN1415-S Chr6 8212872 8212876 0 0 Deletion 4 LOC_Os06g14590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1415-S Chr7 10569786 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr7 112525 112527 0 0 Deletion 2 FN1415-S Chr7 14638624 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr7 22026436 22026439 0 0 Deletion 3 LOC_Os07g36760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1415-S Chr7 28354245 28354245 0 0 Insertion 2 FN1415-S Chr7 8437178 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1415-S Chr8 12951652 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr8 17831175 17831186 0 0 Deletion 11 FN1415-S Chr9 11199709 11199719 0 0 Deletion 10 LOC_Os09g18240 retrotransposon protein, putative, unclassified, expressed FN1415-S Chr9 12432828 12432840 0 0 Deletion 12 FN1415-S Chr9 12677596 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g21020 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1415-S Chr9 13105802 13105803 0 0 Deletion 1 FN1415-S Chr9 13727631 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1415-S Chr9 13805119 C-G 0 0 Single Base Substitution 0 INTRON Homo FN1415-S Chr9 20897035 20897037 0 0 Deletion 2 FN1415-S Chr9 6974250 6974250 0 0 Insertion 1