FN1424-S Chr1 10108404 10346440 0 0 Inversion 238036 FN1424-S Chr1 10109494 10362401 0 0 Inversion 252907 FN1424-S Chr1 10351837 11537518 0 0 Inversion 1185681 FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18440 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18450 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18460 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18470 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18480 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18490 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18500 transposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18530 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18550 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18560 transposon protein, putative, CACTA, En/Spm sub-class FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18584 WRKY9, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18610 retrotransposon protein, putative, LINE subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18620 transferase family protein, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18630 aspartic proteinase oryzasin-1 precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18640 aminotransferase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18650 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18660 aminotransferase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18670 MDR-like ABC transporter, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18680 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18690 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18700 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18710 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18720 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18730 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18744 transferase family protein, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18760 retrotransposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18770 retrotransposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18780 fibroin heavy chain precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18790 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18800 CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18810 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18830 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18840 IF, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18850 OsSPL1 - SBP-box gene family member, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18860 S-adenosylmethionine synthetase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18870 helix-loop-helix DNA-binding domain containing protein, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18880 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18890 peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18900 stigma specific peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18910 peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18920 hAT dimerisation domain-containing protein, putative FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18930 peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18940 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18950 peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18960 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18970 peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18980 transposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g18990 retrotransposon protein, putative, Ty3-gypsy subclass FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19010 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19020 peroxidase precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19030 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19050 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19060 transposon protein, putative, CACTA, En/Spm sub-class FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19070 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19080 ligA, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19090 retrotransposon protein, putative, Ty3-gypsy subclass FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19110 transposon protein, putative, CACTA, En/Spm sub-class FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19120 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19130 protein phosphatase 2C, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19140 O-sialoglycoprotein endopeptidase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19150 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19160 protein kinase domain containing protein, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19170 polygalacturonase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19190 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19200 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19210 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19220 beta-D-xylosidase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19230 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19240 integral membrane protein DUF6 containing protein, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19250 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19260 ATPase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19270 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19280 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19290 integral membrane protein DUF6 containing protein, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19300 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19310 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19320 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19330 MYB family transcription factor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19340 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19350 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19360 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19370 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19380 pentatricopeptide, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19390 glycerol-3-phosphate acyltransferase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19400 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19410 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19420 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19430 3-5 exonuclease domain-containing protein, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19440 pectinesterase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19450 ATP-citrate synthase subunit 1, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19460 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19470 nodal modulator 1 precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19480 kelch motif family protein, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19490 pentatricopeptide, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19500 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19529 pentatricopeptide, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19548 pentatricopeptide, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19570 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19580 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19610 plant protein of unknown function domain containing protein, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19620 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19630 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19640 retrotransposon protein, putative, Ty3-gypsy subclass FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19660 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19670 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19680 retrotransposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19694 Homeobox domain containing protein, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19730 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19740 calvin cycle protein CP12, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19750 glycosyl hydrolase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19760 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19770 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19780 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19790 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19800 zinc finger, C3HC4 type, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19820 universal stress protein domain containing protein, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19830 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19840 60S ribosomal protein L29-2, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19850 amino acid permease family protein, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19860 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19870 hydrolase, acting on carbon-nitrogen, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19880 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19894 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19910 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19920 retrotransposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19930 retrotransposon protein, putative, unclassified FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19940 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19950 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19960 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19970 MYB family transcription factor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19980 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g19990 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20000 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20010 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20020 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20030 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20040 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20050 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20060 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20070 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20080 transposon protein, putative, CACTA, En/Spm sub-class FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20100 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20110 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20120 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20130 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20140 latency associated nuclear antigen, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20150 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20160 OsHKT1;5 - Na+ transporter, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20170 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20204 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20206 methyltransferase, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20208 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20700 hypothetical protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20710 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20720 CC-NBS-LRR, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20730 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20740 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20750 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20760 transposon protein, putative, unclassified, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20770 expressed protein FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20780 anther-specific protein SF18 precursor, putative, expressed FN1424-S Chr1 10362395 11592486 0 0 Deletion 1230091 LOC_Os01g20800 expressed protein FN1424-S Chr1 11537511 11592480 0 0 Inversion 54969 FN1424-S Chr1 12671405 12671663 0 0 Deletion 258 FN1424-S Chr1 13998737 13998738 0 0 Deletion 1 FN1424-S Chr1 17823737 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g32500 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 20080103 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr1 2382665 A-G 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN1424-S Chr1 25479624 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g44430 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr1 39038186 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr1 39829447 39830928 0 0 Deletion 1481 LOC_Os01g68570 expressed protein FN1424-S Chr1 40603869 40603884 0 0 Deletion 15 FN1424-S Chr10 12973451 C-T 0 0 Single Base Substitution 0 INTRON HET FN1424-S Chr10 16382690 16382692 0 0 Deletion 2 FN1424-S Chr10 5304480 C-T 0 0 Single Base Substitution 0 INTRON HET FN1424-S Chr10 6636712 6636712 0 0 Insertion 2 FN1424-S Chr10 6776389 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr10 8668883 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr11 12611093 12611094 0 0 Deletion 1 FN1424-S Chr11 17902605 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr11 18731003 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1424-S Chr11 18732891 18732900 0 0 Deletion 9 LOC_Os11g31880 phosphoglycerate mutase, putative, expressed FN1424-S Chr11 23817490 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr11 24285165 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr11 25231409 25231426 0 0 Deletion 17 FN1424-S Chr11 27699841 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr11 871553 871553 0 0 Insertion 2 FN1424-S Chr12 20487000 20487173 0 0 Inversion 173 FN1424-S Chr12 24364974 24364975 0 0 Deletion 1 FN1424-S Chr2 1037795 1037796 0 0 Deletion 1 FN1424-S Chr2 10831972 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g18570 retrotransposon protein, putative, Ty3-gypsy subclass FN1424-S Chr2 11311985 11311986 0 0 Deletion 1 FN1424-S Chr2 11723886 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1424-S Chr2 11989684 11989693 0 0 Deletion 9 FN1424-S Chr2 13441569 13441571 0 0 Deletion 2 LOC_Os02g22530 retrotransposon protein, putative, Ty3-gypsy subclass FN1424-S Chr2 13443025 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr2 1959741 Chr1 10109483 0 Translocation 0 LOC_Os02g04440 transducin family protein, putative, expressed FN1424-S Chr2 1959752 Chr1 10108411 0 Translocation 0 LOC_Os02g04440 transducin family protein, putative, expressed FN1424-S Chr2 28224967 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1424-S Chr3 17957902 17957905 0 0 Deletion 3 FN1424-S Chr3 21858087 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr3 27780451 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr3 5363560 5363570 0 0 Deletion 10 FN1424-S Chr3 6493244 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr3 7798010 T-C 0 0 Single Base Substitution 0 INTRON HET FN1424-S Chr4 15526245 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr4 17317021 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr4 28021576 28021580 0 0 Deletion 4 LOC_Os04g47180 expressed protein FN1424-S Chr4 35088827 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g58980 pentatricopeptide, putative, expressed FN1424-S Chr5 24031616 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr6 11905607 11905608 0 0 Deletion 1 LOC_Os06g20660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1424-S Chr6 20213453 Chr1 12671643 0 Translocation 0 LOC_Os01g22550 galactosyltransferase family protein, putative, expressed FN1424-S Chr6 20213453 Chr1 12671643 0 Translocation 0 LOC_Os06g34780 expressed protein FN1424-S Chr6 20213454 Chr1 12671434 0 Translocation 0 LOC_Os01g22550 galactosyltransferase family protein, putative, expressed FN1424-S Chr6 20213454 Chr1 12671434 0 Translocation 0 LOC_Os06g34780 expressed protein FN1424-S Chr6 23463394 Chr3 29226748 0 Translocation 0 LOC_Os06g39515 expressed protein FN1424-S Chr6 23503381 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1424-S Chr6 31078305 31078331 0 0 Deletion 26 FN1424-S Chr6 3286456 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr6 3286457 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1424-S Chr6 9759362 9759373 0 0 Deletion 11 LOC_Os06g16850 retrotransposon protein, putative, unclassified, expressed FN1424-S Chr7 11352522 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr7 15343683 15343687 0 0 Deletion 4 FN1424-S Chr7 17885663 A-T 0 0 Single Base Substitution 0 INTRON HET FN1424-S Chr7 2198099 2198120 0 0 Deletion 21 FN1424-S Chr7 25892024 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g43200 retrotransposon protein, putative, LINE subclass, expressed FN1424-S Chr7 9835008 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr8 770796 T-C 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1424-S Chr8 9601478 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1424-S Chr9 11757658 11757661 0 0 Deletion 3 FN1424-S Chr9 16220472 16220472 0 0 Insertion 3 FN1424-S Chr9 16485323 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1424-S Chr9 3491975 3491976 0 0 Deletion 1 FN1424-S Chr9 9872912 C-T 0 0 Single Base Substitution 0 INTERGENIC HET