FN1444-S Chr1 14196489 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr1 15803200 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr1 20477679 20477680 0 0 Deletion 1 FN1444-S Chr1 29199100 29199100 0 0 Insertion 2 FN1444-S Chr1 33039261 A-G 0 0 Single Base Substitution 0 INTRON HET FN1444-S Chr10 12654191 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1444-S Chr10 21996470 21996470 0 0 Insertion 4 FN1444-S Chr10 7387703 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN1444-S Chr11 14288053 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN1444-S Chr11 15824640 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g27510 transposon protein, putative, CACTA, En/Spm sub-class FN1444-S Chr12 19830141 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1444-S Chr12 20544912 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr12 27364465 27364487 0 0 Deletion 22 FN1444-S Chr12 7394959 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr12 8540836 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g14930 ATP synthase protein MI25, putative, expressed FN1444-S Chr2 17816004 18415305 0 0 Inversion 599301 LOC_Os02g29980 X8 domain containing protein, expressed FN1444-S Chr2 17816004 18415305 0 0 Inversion 599301 LOC_Os02g30850 OsGrx_C8 - glutaredoxin subgroup III, expressed FN1444-S Chr2 18931283 18931288 0 0 Deletion 5 FN1444-S Chr2 19074958 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN1444-S Chr2 21511340 21511341 0 0 Deletion 1 FN1444-S Chr2 25586548 25586548 0 0 Insertion 2 FN1444-S Chr2 25970141 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1444-S Chr2 25970143 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1444-S Chr2 25981673 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1444-S Chr2 9450165 9450173 0 0 Deletion 8 LOC_Os02g16544 expressed protein FN1444-S Chr3 17669180 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr3 18581726 18581738 0 0 Deletion 12 FN1444-S Chr3 27225713 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr3 34554526 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1444-S Chr4 12837871 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr4 22949017 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN1444-S Chr4 26252061 26252062 0 0 Deletion 1 LOC_Os04g44320 transposon protein, putative, unclassified, expressed FN1444-S Chr4 4607071 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr5 14442035 14442051 0 0 Deletion 16 LOC_Os05g24960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1444-S Chr5 14444761 14444781 0 0 Deletion 20 FN1444-S Chr5 15443697 15443708 0 0 Deletion 11 LOC_Os05g26580 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr5 17850636 17850648 0 0 Deletion 12 FN1444-S Chr5 7975444 C-T 0 0 Single Base Substitution 0 INTRON HET FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20180 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20190 aspartic proteinase nepenthesin-2 precursor, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20200 gibberellin receptor GID1L2, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20210 transposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20230 retrotransposon protein, putative, unclassified FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20240 latency associated nuclear antigen, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20250 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20260 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20270 hypothetical protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20290 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20300 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20310 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20320 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20330 hypothetical protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20340 dual specificity protein phosphatase, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20354 PPR repeat domain containing protein, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20370 microtubule associated protein, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20380 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20390 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20400 DHHC zinc finger domain containing protein, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20410 BAH domain containing protein, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20420 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20430 BPI/LBP family protein At3g20270 precursor, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20450 hypothetical protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20460 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20470 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20480 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20490 retrotransposon protein, putative, LINE subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20500 tRNA-splicing endonuclease positive effector-related, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20520 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20530 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20550 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20560 transposon protein, putative, CACTA, En/Spm sub-class FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20570 glycosyltransferase, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20600 retrotransposon protein, putative, unclassified FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20610 seven in absentia protein family domain containing protein, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20620 OsMan07 - Endo-Beta-Mannanase, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20630 SAM dependent carboxyl methyltransferase, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20640 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20670 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20680 retrotransposon protein, putative, unclassified FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20690 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20700 retrotransposon protein, putative, unclassified FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20710 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20720 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20740 hypothetical protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20750 transposon protein, putative, unclassified, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20760 expressed protein FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20770 SAM dependent carboxyl methyltransferase, putative, expressed FN1444-S Chr6 11574001 11999000 0 0 Deletion 425000 LOC_Os06g20790 SAM dependent carboxyl methyltransferase, putative, expressed FN1444-S Chr6 13627872 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g23340 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1444-S Chr6 18029927 Chr3 14532758 0 Translocation 0 LOC_Os06g30990 retrotransposon protein, putative, unclassified, expressed FN1444-S Chr6 26444002 26444009 0 0 Deletion 7 FN1444-S Chr6 410664 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr7 14484975 Chr4 17873667 0 Translocation 0 FN1444-S Chr7 26760017 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1444-S Chr8 20452783 20453866 0 0 Deletion 1083 FN1444-S Chr8 26530008 26530008 0 0 Insertion 1 FN1444-S Chr8 8150356 8150365 0 0 Deletion 9 FN1444-S Chr9 11134173 11134176 0 0 Deletion 3 FN1444-S Chr9 13856623 13856639 0 0 Deletion 16 FN1444-S Chr9 22307975 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET