FN1446-S Chr1 13575968 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1446-S Chr1 13993148 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr1 16562424 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1446-S Chr1 23327221 23327222 0 0 Deletion 1 FN1446-S Chr1 2379537 2379544 0 0 Deletion 7 FN1446-S Chr10 19326489 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01480 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01490 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01500 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01510 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01520 transposon protein, putative, CACTA, En/Spm sub-class FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01530 helix-loop-helix DNA-binding domain containing protein, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01540 notchless protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01550 transposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01560 serine/threonine-protein kinase, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01570 C-5 cytosine-specific DNA methylase, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01580 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01590 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01600 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01610 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01620 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01640 decarboxylase, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01650 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01660 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01670 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01680 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01690 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01700 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01710 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01720 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01730 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01740 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01750 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01760 peroxidase precursor, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01770 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01780 retrotransposon protein, putative, unclassified FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01790 transposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01800 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01810 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01820 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01830 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01840 hypothetical protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01844 expressed protein FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01850 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01860 retrotransposon protein, putative, LINE subclass, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01870 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01880 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01890 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01900 retrotransposon protein, putative, LINE subclass, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01910 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01920 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01930 transferase family protein, putative, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01970 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr10 287001 616000 0 0 Deletion 329000 LOC_Os10g01984 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1446-S Chr10 411707 411708 0 0 Deletion 1 FN1446-S Chr10 566368 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr10 6399026 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr11 13540695 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr11 15264208 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1446-S Chr11 18676845 18676845 0 0 Insertion 1 FN1446-S Chr11 28694335 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr11 3710388 3710388 0 0 Insertion 2 FN1446-S Chr11 5369142 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1446-S Chr12 12064464 12064464 0 0 Insertion 1 FN1446-S Chr12 12631597 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr12 19964978 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr12 22378261 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr12 26049041 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr12 3745048 3745052 0 0 Deletion 4 LOC_Os12g07530 splicing factor, putative, expressed FN1446-S Chr12 3873675 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1446-S Chr12 6733250 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g12260 diacylglycerol kinase 1, putative, expressed FN1446-S Chr2 17240848 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr2 17326875 17326875 0 0 Insertion 2 FN1446-S Chr2 27570526 27570528 0 0 Deletion 2 FN1446-S Chr2 34791291 C-A 0 0 Single Base Substitution 0 INTRON HET FN1446-S Chr2 7217584 7217587 0 0 Deletion 3 FN1446-S Chr3 15240194 C-T 0 0 Single Base Substitution 0 INTRON HET FN1446-S Chr3 16196465 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr3 2092184 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1446-S Chr3 2202986 2202987 0 0 Deletion 1 FN1446-S Chr3 27975112 27975127 0 0 Deletion 15 FN1446-S Chr3 27979379 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1446-S Chr3 4035361 4035373 0 0 Deletion 12 FN1446-S Chr4 10730314 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr4 19993380 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr4 21823640 21864201 0 0 Inversion 40561 LOC_Os04g35800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN1446-S Chr4 21823640 21864201 0 0 Inversion 40561 LOC_Os04g35880 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr4 29998850 29998851 0 0 Deletion 1 FN1446-S Chr5 10898096 10898097 0 0 Deletion 1 FN1446-S Chr5 16826067 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g28680 retrotransposon protein, putative, unclassified, expressed FN1446-S Chr5 19628573 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr5 21768905 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr5 23507453 23507463 0 0 Deletion 10 FN1446-S Chr5 6883918 C-T 0 0 Single Base Substitution 0 INTRON HET FN1446-S Chr5 9313269 G-T 0 0 Single Base Substitution 0 INTRON HET FN1446-S Chr6 1317190 1317195 0 0 Deletion 5 FN1446-S Chr6 14546078 14546099 0 0 Deletion 21 FN1446-S Chr6 23454462 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr6 278195 A-G 0 0 Single Base Substitution 0 INTRON HET FN1446-S Chr6 30070429 C-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN1446-S Chr6 5469111 C-T 0 0 Single Base Substitution 0 INTRON HET FN1446-S Chr7 11444021 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1446-S Chr7 2596545 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g05550 expressed protein FN1446-S Chr7 9531822 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN1446-S Chr8 18290605 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1446-S Chr9 12624213 12624213 0 0 Insertion 2 FN1446-S Chr9 16993693 A-G 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HOMO FN1446-S Chr9 17058083 17058084 0 0 Deletion 1 FN1446-S Chr9 17396184 17396193 0 0 Deletion 9 FN1446-S Chr9 17982805 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g29570 expressed protein FN1446-S Chr9 7745935 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1446-S Chr9 8764075 G-A 0 0 Single Base Substitution 0 INTERGENIC HET