FN1455-S Chr1 16045861 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr1 19363112 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr1 1974296 G-A 0 0 Single Base Substitution 0 INTRON HET FN1455-S Chr1 22475214 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g39850 histone-like transcription factor and archaeal histone, putative, expressed FN1455-S Chr1 22530093 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr1 26573691 26573702 0 0 Deletion 11 LOC_Os01g46660 transposon protein, putative, unclassified, expressed FN1455-S Chr1 30567687 30567689 0 0 Deletion 2 FN1455-S Chr1 38530708 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr1 39291779 39291782 0 0 Deletion 3 LOC_Os01g67590 oligopeptidase, putative, expressed FN1455-S Chr1 40469277 40469277 0 0 Insertion 2 FN1455-S Chr1 4052485 4052486 0 0 Deletion 1 LOC_Os01g08270 aminotransferase, classes I and II, domain containing protein, expressed FN1455-S Chr1 41168764 41168772 0 0 Deletion 8 FN1455-S Chr10 16731741 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os10g31864 expressed protein FN1455-S Chr10 18363836 18363838 0 0 Deletion 2 LOC_Os10g34430 Dicer, putative, expressed FN1455-S Chr10 610475 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1455-S Chr10 8143135 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr11 15054832 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1455-S Chr11 4838478 Chr4 18124174 0 Translocation 0 LOC_Os04g30370 OsWAK57 - OsWAK receptor-like protein kinase, expressed FN1455-S Chr11 506546 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr11 8857487 8857492 0 0 Deletion 5 FN1455-S Chr12 3423797 3423823 0 0 Deletion 26 FN1455-S Chr12 4334863 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1455-S Chr2 115824 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1455-S Chr2 12173966 12173967 0 0 Deletion 1 LOC_Os02g20660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr2 1963268 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g04440 transducin family protein, putative, expressed FN1455-S Chr2 20065076 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr2 24025481 24025497 0 0 Deletion 16 LOC_Os02g39764 expressed protein FN1455-S Chr2 3293516 3293521 0 0 Deletion 5 LOC_Os02g06580 formin, putative, expressed FN1455-S Chr3 11685279 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr3 17370683 C-T 0 0 Single Base Substitution 0 INTRON HET FN1455-S Chr3 18372966 18372967 0 0 Deletion 1 FN1455-S Chr3 19284032 21413962 0 0 Inversion 2129930 FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39129 frigida, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39150 protein kinase domain containing protein, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39160 frigida, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39170 frigida, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39190 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39200 hypothetical protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39210 retrotransposon protein, putative, unclassified, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39220 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39224 hypothetical protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39230 OTU-like cysteine protease family protein, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39240 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39270 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39284 retrotransposon protein, putative, unclassified, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39300 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39310 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39356 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39362 retrotransposon protein, putative, unclassified FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39370 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39380 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39390 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39400 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39407 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39432 CPuORF31 - conserved peptide uORF-containing transcript, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39460 retrotransposon, putative, centromere-specific FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39490 retrotransposon protein, putative, Ty3-gypsy subclass FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39510 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39520 plant protein of unknown function domain containing protein, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39530 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39540 cytochrome P450, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39550 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39560 retrotransposon protein, putative, unclassified, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39580 retrotransposon protein, putative, unclassified, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39590 retrotransposon protein, putative, unclassified, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39594 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39598 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39602 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39610 chlorophyll A-B binding protein, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39620 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39629 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39640 CBS domain containing protein, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39650 cytochrome P450, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39655 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39660 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39670 retrotransposon protein, putative, unclassified FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39680 retrotransposon protein, putative, LINE subclass FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39690 cytochrome P450, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39700 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39710 transporter family protein, putative, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39720 expressed protein FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr3 21738001 22118000 0 0 Deletion 380000 LOC_Os03g39740 expressed protein FN1455-S Chr3 26047137 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr3 32978808 32978809 0 0 Deletion 1 FN1455-S Chr3 33252240 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr3 4372472 4372480 0 0 Deletion 8 LOC_Os03g08500 AP2 domain containing protein, expressed FN1455-S Chr4 13103165 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr4 19531935 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr4 23463682 23463683 0 0 Deletion 1 LOC_Os04g39420 6-phosphofructokinase 2, putative, expressed FN1455-S Chr4 25694895 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1455-S Chr4 31345109 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr4 31908183 31908189 0 0 Deletion 6 FN1455-S Chr4 33160682 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr4 7331929 7331943 0 0 Deletion 14 LOC_Os04g13240 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1455-S Chr4 7381594 7381613 0 0 Deletion 19 FN1455-S Chr4 7834181 7834187 0 0 Deletion 6 FN1455-S Chr5 12672967 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr5 15449436 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr5 18648370 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr5 5260643 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1455-S Chr6 14853795 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1455-S Chr6 25057131 25065229 0 0 Deletion 8098 LOC_Os06g41790 RNA recognition motif containing protein, putative, expressed FN1455-S Chr6 26011140 26011147 0 0 Deletion 7 FN1455-S Chr6 2740820 2740912 0 0 Deletion 92 FN1455-S Chr7 4772160 4772160 0 0 Insertion 1 FN1455-S Chr8 13573305 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g22540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1455-S Chr8 19046061 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g30850 YDG/SRA domain containing protein, expressed FN1455-S Chr8 19046062 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1455-S Chr8 22369638 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1455-S Chr9 8022902 8022909 0 0 Deletion 7 LOC_Os09g13710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed