FN1463-S Chr1 1814856 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr1 2141408 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN1463-S Chr1 30877811 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr1 319576 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr1 34576311 34576352 0 0 Deletion 41 FN1463-S Chr1 39945586 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr1 40907142 41174134 0 0 Inversion 266992 LOC_Os01g70660 potassium transporter, putative, expressed FN1463-S Chr1 40907164 41174159 0 0 Inversion 266995 LOC_Os01g70660 potassium transporter, putative, expressed FN1463-S Chr10 10508642 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr10 15013277 15427224 0 0 Inversion 413947 LOC_Os10g29660 TATA-binding protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29660 TATA-binding protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29670 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29680 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29690 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29700 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29710 hypothetical protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29720 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29730 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29740 MBTB55 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29750 MBTB56 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29760 hypothetical protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29790 MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29800 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29810 MBTB58 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29820 snRNP protein, putative FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29830 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29840 MBTB59 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29850 MBTB60 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29870 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29880 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29900 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29920 snRNP protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29930 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29940 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29950 speckle-type POZ protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29960 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29970 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g29990 retrotransposon protein, putative, Ty3-gypsy subclass FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30010 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30020 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30040 BTB/POZ domain containing protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30054 ENT domain containing protein, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30070 sodium/calcium exchanger protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30080 xylosyltransferase, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30090 amino acid permease, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30100 3-5 exonuclease family protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30120 laccase-9 precursor, putative FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30130 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30140 laccase-16, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30150 universal stress protein domain containing protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30156 starch synthase, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30162 hsp20/alpha crystallin family protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30170 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30180 hsp20/alpha crystallin family protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30190 BTBP2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30200 SKP1-like protein 1B, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30210 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30220 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30230 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30240 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30250 transposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30260 transposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30270 retrotransposon, putative, centromere-specific, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30280 OsFBX386 - F-box domain containing protein, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30290 GDSL-like lipase/acylhydrolase, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30300 TRM112, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30310 zinc finger, C3HC4 type domain containing protein, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30330 expansin precursor, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30340 expansin precursor, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30350 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30360 MATH domain containing protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30370 RNA recognition motif containing protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30380 cytochrome P450, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30390 cytochrome P450, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30410 cytochrome P450 71D7, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30420 transcription factor Dp, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30430 heavy metal-associated domain containing protein, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30440 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30450 heavy-metal-associated domain-containing protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30460 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30480 expressed protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30490 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30500 hypothetical protein FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30510 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30520 ras-related protein, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30530 lectin-like receptor kinase, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30540 lectin-like receptor kinase, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30550 tRNA methyltransferase, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30560 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30580 cell division control protein 48 homolog E, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30590 pentatricopeptide, putative, expressed FN1463-S Chr10 15427001 15925000 0 0 Deletion 498000 LOC_Os10g30600 tyrosine protein kinase domain containing protein, putative, expressed FN1463-S Chr10 1823921 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr10 1823922 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr11 10472843 10472845 0 0 Deletion 2 FN1463-S Chr11 22223380 22223380 0 0 Insertion 4 FN1463-S Chr11 27699077 27699077 0 0 Insertion 2 FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08490 expressed protein FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08500 expressed protein FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08510 retrotransposon protein, putative, Ty1-copia subclass FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08520 expressed protein FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08536 expressed protein FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08542 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08550 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr11 4483001 4525000 0 0 Deletion 42000 LOC_Os11g08569 cycloartenol synthase, putative, expressed FN1463-S Chr11 9222409 9222437 0 0 Deletion 28 FN1463-S Chr12 10159735 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g17740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1463-S Chr12 14782058 14782062 0 0 Deletion 4 LOC_Os12g25530 transposon protein, putative, CACTA, En/Spm sub-class FN1463-S Chr12 21146851 21146856 0 0 Deletion 5 FN1463-S Chr12 22531360 22531365 0 0 Deletion 5 LOC_Os12g36770 lipase class 3 family protein, putative, expressed FN1463-S Chr12 23521192 23521192 0 0 Insertion 4 LOC_Os12g38320 expressed protein FN1463-S Chr12 26106709 A-G 0 0 Single Base Substitution 0 INTRON HET FN1463-S Chr12 26194535 26194546 0 0 Deletion 11 LOC_Os12g42220 expressed protein FN1463-S Chr12 4311891 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g08500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1463-S Chr12 7933447 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr2 14986001 15027000 0 0 Deletion 41000 LOC_Os02g25640 glutelin, putative, expressed FN1463-S Chr2 14986001 15027000 0 0 Deletion 41000 LOC_Os02g25650 expressed protein FN1463-S Chr2 14986001 15027000 0 0 Deletion 41000 LOC_Os02g25670 retrotransposon, putative, centromere-specific, expressed FN1463-S Chr2 23925763 23925763 0 0 Insertion 1 FN1463-S Chr2 27647359 27647359 0 0 Insertion 2 FN1463-S Chr2 8368359 8368362 0 0 Deletion 3 FN1463-S Chr2 9921801 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr3 10202659 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr3 21741766 21741766 0 0 Insertion 2 FN1463-S Chr3 23173222 23173231 0 0 Deletion 9 LOC_Os03g41710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1463-S Chr3 28140939 28140943 0 0 Deletion 4 LOC_Os03g49430 pre-mRNA-splicing factor, putative, expressed FN1463-S Chr3 33127137 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr3 3978204 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr3 4749055 Chr1 29064641 0 Translocation 0 LOC_Os03g09120 expressed protein FN1463-S Chr4 13123690 13123691 0 0 Deletion 1 FN1463-S Chr4 14855947 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g25640 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1463-S Chr4 16781947 16781947 0 0 Insertion 2 FN1463-S Chr4 17198875 17198934 0 0 Deletion 59 FN1463-S Chr4 22724307 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr4 5739657 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g10569 glutamyl-tRNA amidotransferase, putative, expressed FN1463-S Chr4 7800916 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr5 11237878 C-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os05g19350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1463-S Chr5 6519464 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr5 8655628 8655638 0 0 Deletion 10 LOC_Os05g15260 retrotransposon protein, putative, Ty3-gypsy subclass FN1463-S Chr6 12318935 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed FN1463-S Chr6 13176361 13408768 0 0 Inversion 232407 LOC_Os06g22960 aquaporin protein, putative, expressed FN1463-S Chr6 13176381 13408784 0 0 Inversion 232403 LOC_Os06g22960 aquaporin protein, putative, expressed FN1463-S Chr6 14198731 14454824 0 0 Inversion 256093 LOC_Os06g24250 expressed protein FN1463-S Chr6 3926660 3976479 0 0 Inversion 49819 LOC_Os06g08090 heparanase-like protein precursor, putative, expressed FN1463-S Chr7 1448857 1448860 0 0 Deletion 3 FN1463-S Chr7 18984209 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN1463-S Chr7 20384955 20384958 0 0 Deletion 3 FN1463-S Chr7 6048921 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr7 7779782 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr7 8045906 8045906 0 0 Insertion 4 FN1463-S Chr7 9775462 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1463-S Chr8 12628816 G-A 0 0 Single Base Substitution 0 INTRON HET FN1463-S Chr8 13034032 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1463-S Chr8 18631943 Chr7 16356425 0 Translocation 0 LOC_Os07g28050 retrotransposon protein, putative, unclassified, expressed FN1463-S Chr8 21974167 G-A 0 0 Single Base Substitution 0 START_GAINED HOMO LOC_Os08g34895 expressed protein FN1463-S Chr8 23176737 23176757 0 0 Deletion 20 FN1463-S Chr8 3412758 3412771 0 0 Deletion 13 LOC_Os08g06180 reticuline oxidase precursor, putative FN1463-S Chr8 360094 Chr2 532399 0 Translocation 0 LOC_Os08g01600 polygalacturonase, putative, expressed FN1463-S Chr9 1069778 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr9 17474300 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1463-S Chr9 20256794 20256805 0 0 Deletion 11 FN1463-S Chr9 9098577 9098580 0 0 Deletion 3 FN1463-S Chr9 9271519 C-T 0 0 Single Base Substitution 0 INTERGENIC HET