FN1466-S Chr1 11005990 11005990 0 0 Insertion 1 LOC_Os01g19450 ATP-citrate synthase subunit 1, putative, expressed FN1466-S Chr1 11420025 T-C 0 0 Single Base Substitution 0 INTRON Homo FN1466-S Chr1 11835729 11835755 0 0 Deletion 26 LOC_Os01g21210 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr1 15822758 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr1 20114074 21102014 0 0 Inversion 987940 LOC_Os01g36280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1466-S Chr1 20114097 21078679 0 0 Inversion 964582 LOC_Os01g36280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1466-S Chr1 20114097 21078679 0 0 Inversion 964582 LOC_Os01g37700 expressed protein FN1466-S Chr1 2019320 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr1 28208037 28208037 0 0 Insertion 1 FN1466-S Chr1 28749998 G-T 0 0 Single Base Substitution 0 INTRON HET FN1466-S Chr1 28750001 A-G 0 0 Single Base Substitution 0 INTRON HET FN1466-S Chr1 37785629 37785629 0 0 Insertion 1 FN1466-S Chr1 41143680 41143683 0 0 Deletion 3 FN1466-S Chr10 10043080 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1466-S Chr10 12598029 12598029 0 0 Insertion 61 FN1466-S Chr10 16993116 17133254 0 0 Inversion 140138 LOC_Os10g32730 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed FN1466-S Chr10 17118894 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1466-S Chr10 22384013 22384025 0 0 Deletion 12 FN1466-S Chr10 22849413 22849414 0 0 Deletion 1 FN1466-S Chr10 2320214 2330155 0 0 Deletion 9941 LOC_Os10g04810 retrotransposon protein, putative, Ty3-gypsy subclass FN1466-S Chr10 2484291 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1466-S Chr10 6560824 6560825 0 0 Deletion 1 FN1466-S Chr11 11993691 11993691 0 0 Insertion 1 FN1466-S Chr11 24575358 24575482 0 0 Deletion 124 FN1466-S Chr11 25939426 25939445 0 0 Deletion 19 FN1466-S Chr11 27698016 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr11 679034 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1466-S Chr12 12991177 12991185 0 0 Deletion 8 LOC_Os12g22980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1466-S Chr12 13238514 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr12 14113858 14113859 0 0 Deletion 1 FN1466-S Chr12 23202868 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr12 4131798 4131798 0 0 Insertion 16 FN1466-S Chr2 13620939 13635289 0 0 Deletion 14350 FN1466-S Chr2 16743566 16744086 0 0 Deletion 520 LOC_Os02g28330 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr2 16789973 16789982 0 0 Deletion 9 LOC_Os02g28400 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr2 28136309 28136328 0 0 Deletion 19 FN1466-S Chr2 32625278 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr2 9042493 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32010 hypothetical protein FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32020 conserved hypothetical protein FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32030 DNA-directed RNA polymerase II subunit RPB1, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32040 phenazine biosynthesis protein, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32050 peroxidase precursor, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32070 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32090 pentatricopeptide, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32100 spotted leaf 11, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32119 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32140 expressed protein FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32150 expressed protein FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32160 calmodulin binding protein, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32170 NAD dependent epimerase/dehydratase family protein, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32180 polygalacturonase inhibitor 1 precursor, putative, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32190 transposon protein, putative, unclassified, expressed FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32200 expressed protein FN1466-S Chr3 18306001 18427000 0 0 Deletion 121000 LOC_Os03g32210 retrotransposon protein, putative, unclassified FN1466-S Chr3 20101450 20101451 0 0 Deletion 1 FN1466-S Chr3 20541202 20541203 0 0 Deletion 1 FN1466-S Chr3 24994608 24994610 0 0 Deletion 2 FN1466-S Chr3 25163323 25163328 0 0 Deletion 5 FN1466-S Chr3 25747445 A-G 0 0 Single Base Substitution 0 INTRON HET FN1466-S Chr4 14128543 14128544 0 0 Deletion 1 FN1466-S Chr4 17184290 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr4 17576238 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr4 18614177 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr4 2103035 2103037 0 0 Deletion 2 FN1466-S Chr4 25013786 25013786 0 0 Insertion 32 FN1466-S Chr4 2583469 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g05180 retrotransposon protein, putative, unclassified FN1466-S Chr4 27621532 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1466-S Chr4 3319164 A-T 0 0 Single Base Substitution 0 INTRON Homo FN1466-S Chr5 12495322 12495322 0 0 Insertion 1 FN1466-S Chr5 26212169 26212173 0 0 Deletion 4 LOC_Os05g45140 glucosyl transferase, putative, expressed FN1466-S Chr5 3899709 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g07330 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr5 5129820 5129821 0 0 Deletion 1 FN1466-S Chr5 596373 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g02040 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed FN1466-S Chr6 11942741 G-A 0 0 Single Base Substitution 0 INTRON HET FN1466-S Chr6 14925418 14925427 0 0 Deletion 9 FN1466-S Chr6 30923107 30923108 0 0 Deletion 1 FN1466-S Chr6 5883097 5883097 0 0 Insertion 1 FN1466-S Chr7 24103192 24103198 0 0 Deletion 6 FN1466-S Chr7 26339271 26339341 0 0 Deletion 70 FN1466-S Chr7 28112975 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1466-S Chr7 4570092 4570092 0 0 Insertion 2 FN1466-S Chr7 5736665 5736671 0 0 Deletion 6 FN1466-S Chr7 6785412 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1466-S Chr8 17905574 17905578 0 0 Deletion 4 LOC_Os08g29200 BURP domain containing protein, expressed FN1466-S Chr8 19072053 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g30900 YDG/SRA domain containing protein, expressed FN1466-S Chr8 21090259 21090259 0 0 Insertion 4 LOC_Os08g33750 myb-like DNA-binding domain containing protein, expressed FN1466-S Chr8 23826109 23826390 0 0 Deletion 281 FN1466-S Chr8 23902321 23902327 0 0 Deletion 6 FN1466-S Chr8 25530398 25530400 0 0 Deletion 2 FN1466-S Chr8 25975756 25975783 0 0 Deletion 27 LOC_Os08g41100 CHIT12 - Chitinase family protein precursor, expressed FN1466-S Chr8 4197182 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g07480 DNA-directed RNA polymerase subunit, putative, expressed FN1466-S Chr9 12637135 12637135 0 0 Insertion 55 FN1466-S Chr9 14855608 Chr1 38029221 0 Translocation 0 LOC_Os01g65520 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed FN1466-S Chr9 14855649 Chr1 38028443 0 Translocation 0 LOC_Os01g65520 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed FN1466-S Chr9 22367053 22367053 0 0 Insertion 1 FN1466-S Chr9 22463086 22463086 0 0 Insertion 6 FN1466-S Chr9 22978001 23013000 0 0 Deletion 35000 LOC_Os09g40030 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr9 22978001 23013000 0 0 Deletion 35000 LOC_Os09g40040 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr9 22978001 23013000 0 0 Deletion 35000 LOC_Os09g40050 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr9 22978001 23013000 0 0 Deletion 35000 LOC_Os09g40060 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr9 22978001 23013000 0 0 Deletion 35000 LOC_Os09g40075 retrotransposon protein, putative, Ty3-gypsy subclass FN1466-S Chr9 22978001 23013000 0 0 Deletion 35000 LOC_Os09g40085 retrotransposon protein, putative, unclassified, expressed FN1466-S Chr9 2442093 2442094 0 0 Deletion 1