FN1470-S Chr1 15872429 15872434 0 0 Deletion 5 LOC_Os01g28330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1470-S Chr1 1617651 1617651 0 0 Insertion 2 FN1470-S Chr1 17634181 G-A 0 0 Single Base Substitution 0 INTRON HET FN1470-S Chr1 18445191 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr1 22035018 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr1 22233857 22233857 0 0 Insertion 2 FN1470-S Chr1 30338304 30338320 0 0 Deletion 16 FN1470-S Chr1 34126304 34126304 0 0 Insertion 8 FN1470-S Chr1 34320225 34320225 0 0 Insertion 14 FN1470-S Chr1 35397321 35397321 0 0 Insertion 1 FN1470-S Chr1 38613823 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1470-S Chr1 42421757 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1470-S Chr1 6597992 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr10 14628716 14628720 0 0 Deletion 4 FN1470-S Chr11 11670559 11670560 0 0 Deletion 1 FN1470-S Chr11 11783013 11783021 0 0 Deletion 8 FN1470-S Chr11 14920330 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1470-S Chr11 25427996 25427998 0 0 Deletion 2 FN1470-S Chr11 5439521 5439538 0 0 Deletion 17 FN1470-S Chr12 17873985 17873985 0 0 Insertion 1 FN1470-S Chr12 20498005 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1470-S Chr12 20524499 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 20526536 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 20527521 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 20527573 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 20534731 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 20544757 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 20613172 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr12 22116757 22116757 0 0 Insertion 6 FN1470-S Chr12 23130025 23130026 0 0 Deletion 1 FN1470-S Chr12 23629743 23629745 0 0 Deletion 2 FN1470-S Chr12 8531678 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr2 11779259 11779267 0 0 Deletion 8 LOC_Os02g20010 retrotransposon protein, putative, LINE subclass, expressed FN1470-S Chr2 22689958 22805704 0 0 Inversion 115746 LOC_Os02g37590 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN1470-S Chr2 22689958 22805704 0 0 Inversion 115746 LOC_Os02g37800 lecithin:cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37590 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37600 expressed protein FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37610 expressed protein FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37620 transposon protein, putative, CACTA, En/Spm sub-class FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37630 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37654 lecithin:cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37680 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37690 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37694 expressed protein FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37700 lecithin:cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37710 lecithine cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37730 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37740 transposon protein, putative, CACTA, En/Spm sub-class FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37750 lecithine cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37760 lecithine cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37770 lecithin cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37780 lecithine cholesterol acyltransferase, putative, expressed FN1470-S Chr2 22690001 22803000 0 0 Deletion 113000 LOC_Os02g37790 retrotransposon protein, putative, unclassified, expressed FN1470-S Chr2 33798551 33798552 0 0 Deletion 1 FN1470-S Chr2 34397341 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr2 5867587 5867587 0 0 Insertion 2 FN1470-S Chr2 694324 694324 0 0 Insertion 1 FN1470-S Chr3 10549658 10549659 0 0 Deletion 1 FN1470-S Chr3 16708020 16708020 0 0 Insertion 2 FN1470-S Chr3 26582948 26582949 0 0 Deletion 1 FN1470-S Chr3 33263607 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr3 33666317 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr3 33666318 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr3 4255670 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr3 5369347 5369348 0 0 Deletion 1 FN1470-S Chr4 10918831 10918836 0 0 Deletion 5 FN1470-S Chr4 14831915 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr4 22230722 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr4 24253645 24253646 0 0 Deletion 1 FN1470-S Chr4 26142708 26142709 0 0 Deletion 1 FN1470-S Chr4 32885173 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr4 32886026 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr4 3808412 3808421 0 0 Deletion 9 LOC_Os04g07170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1470-S Chr4 6109454 6109454 0 0 Insertion 6 FN1470-S Chr4 9334663 9334664 0 0 Deletion 1 FN1470-S Chr5 12295825 C-T 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os05g20914 expressed protein FN1470-S Chr5 1339176 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr5 13958800 13958812 0 0 Deletion 12 FN1470-S Chr5 19382124 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr5 20400484 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr5 25068453 25068453 0 0 Insertion 1 FN1470-S Chr5 29121519 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1470-S Chr5 29214259 29214262 0 0 Deletion 3 LOC_Os05g50910 extra-large G-protein-related, putative, expressed FN1470-S Chr5 29249543 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr5 6409818 6409826 0 0 Deletion 8 LOC_Os05g11340 expressed protein FN1470-S Chr5 6423660 6466530 0 0 Inversion 42870 FN1470-S Chr6 13029500 13029502 0 0 Deletion 2 FN1470-S Chr6 22259300 T-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1470-S Chr6 23747039 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g39920 retrotransposon protein, putative, unclassified, expressed FN1470-S Chr6 25993907 25993916 0 0 Deletion 9 FN1470-S Chr6 26579328 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1470-S Chr6 26579329 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g44060 phospholipase D. Active site motif family protein, expressed FN1470-S Chr6 26799993 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr6 4796198 4826004 0 0 Deletion 29806 LOC_Os06g09450 sucrose synthase, putative, expressed FN1470-S Chr6 4796198 4826004 0 0 Deletion 29806 LOC_Os06g09470 transposon protein, putative, CACTA, En/Spm sub-class FN1470-S Chr6 5627599 7039123 0 0 Inversion 1411524 FN1470-S Chr6 7890957 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1470-S Chr6 9462629 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr7 1997116 1997117 0 0 Deletion 1 FN1470-S Chr7 22746391 22746400 0 0 Deletion 9 FN1470-S Chr7 25597441 25597447 0 0 Deletion 6 FN1470-S Chr7 6811796 6811853 0 0 Deletion 57 FN1470-S Chr7 8569088 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1470-S Chr8 16691072 16691074 0 0 Deletion 2 FN1470-S Chr8 18434902 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g30010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1470-S Chr8 23267555 23267555 0 0 Insertion 20 FN1470-S Chr8 28195168 28195168 0 0 Insertion 27 FN1470-S Chr8 4026983 C-A 0 0 Single Base Substitution 0 INTRON HET FN1470-S Chr8 8843533 8843534 0 0 Deletion 1 LOC_Os08g14710 expressed protein FN1470-S Chr9 13061771 13061771 0 0 Insertion 2 FN1470-S Chr9 20947461 20947467 0 0 Deletion 6 LOC_Os09g36300 OsLonP4 - Putative Lon protease homologue, expressed