FN1477-S Chr1 10252588 10252830 0 0 Deletion 242 FN1477-S Chr1 20459422 22117876 0 0 Inversion 1658454 FN1477-S Chr1 22124108 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1477-S Chr1 24507212 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr1 26571718 G-C 0 0 Single Base Substitution 0 INTRON HET FN1477-S Chr1 334586 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr1 42052750 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1477-S Chr1 6400198 6400206 0 0 Deletion 8 FN1477-S Chr10 11565194 11565199 0 0 Deletion 5 FN1477-S Chr10 13451873 13451873 0 0 Insertion 39 FN1477-S Chr10 1519144 1519454 0 0 Deletion 310 FN1477-S Chr10 17579370 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr10 2319935 2319935 0 0 Insertion 58 FN1477-S Chr10 2402062 2402065 0 0 Deletion 3 FN1477-S Chr10 3023243 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr10 4069573 4069579 0 0 Deletion 6 FN1477-S Chr10 5500939 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr10 7448387 7448405 0 0 Deletion 18 FN1477-S Chr11 12058162 12058196 0 0 Deletion 34 FN1477-S Chr11 19039861 19039861 0 0 Insertion 2 FN1477-S Chr11 24681104 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr11 6641078 6655885 0 0 Inversion 14807 FN1477-S Chr11 7286199 7286200 0 0 Deletion 1 FN1477-S Chr11 8175197 8175197 0 0 Insertion 6 FN1477-S Chr12 11499010 11499031 0 0 Deletion 21 FN1477-S Chr12 11863417 A-T 0 0 Single Base Substitution 0 INTRON HET FN1477-S Chr12 15516369 15516369 0 0 Insertion 6 FN1477-S Chr12 19201403 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g31880 translation initiation factor, putative, expressed FN1477-S Chr12 24525783 24525805 0 0 Deletion 22 FN1477-S Chr12 5668416 5668418 0 0 Deletion 2 FN1477-S Chr12 7205890 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr2 11122890 11122890 0 0 Insertion 1 FN1477-S Chr2 12497959 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr2 16463751 16463803 0 0 Deletion 52 FN1477-S Chr2 2044212 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1477-S Chr2 25204499 25204500 0 0 Deletion 1 FN1477-S Chr2 25567677 25567678 0 0 Deletion 1 FN1477-S Chr2 47109 47110 0 0 Deletion 1 FN1477-S Chr2 6352472 6352474 0 0 Deletion 2 FN1477-S Chr2 7690952 8540748 0 0 Inversion 849796 LOC_Os02g14090 berberine and berberine like domain containing protein, expressed FN1477-S Chr2 7854849 8540747 0 0 Inversion 685898 FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14310 expressed protein FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14320 retrotransposon protein, putative, unclassified, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14330 retrotransposon protein, putative, unclassified, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14340 retrotransposon protein, putative, unclassified, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14350 retrotransposon protein, putative, unclassified, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14360 retrotransposon protein, putative, unclassified, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14370 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14380 retrotransposon, putative, centromere-specific FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14390 retrotransposon, putative, centromere-specific, expressed FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14400 retrotransposon protein, putative, Ty3-gypsy subclass FN1477-S Chr2 7855001 7916000 0 0 Deletion 61000 LOC_Os02g14410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1477-S Chr2 7915543 7926291 0 0 Inversion 10748 LOC_Os02g14410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1477-S Chr3 1131803 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1477-S Chr3 13370559 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g23120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1477-S Chr3 13809827 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr3 14665187 14665188 0 0 Deletion 1 FN1477-S Chr3 22468508 22468573 0 0 Deletion 65 FN1477-S Chr3 31863571 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr3 3696708 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1477-S Chr3 4927812 4927812 0 0 Insertion 2 FN1477-S Chr3 7943470 7943472 0 0 Deletion 2 FN1477-S Chr4 11117085 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1477-S Chr4 13854628 13854649 0 0 Deletion 21 FN1477-S Chr4 14622081 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr4 26187380 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr4 26648657 26648700 0 0 Deletion 43 FN1477-S Chr4 29500341 29500359 0 0 Deletion 18 LOC_Os04g49440 RNA recognition motif containing protein, putative, expressed FN1477-S Chr4 3906719 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1477-S Chr4 5877581 5877581 0 0 Insertion 1 FN1477-S Chr5 11995520 11995530 0 0 Deletion 10 FN1477-S Chr5 15720961 15720961 0 0 Insertion 1 FN1477-S Chr5 17465211 17465213 0 0 Deletion 2 FN1477-S Chr5 24448166 24448167 0 0 Deletion 1 FN1477-S Chr5 24965409 25059780 0 0 Inversion 94371 FN1477-S Chr5 26970125 26970130 0 0 Deletion 5 FN1477-S Chr6 10285990 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1477-S Chr6 12524160 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr6 19695267 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr6 22262829 22262830 0 0 Deletion 1 FN1477-S Chr6 25662514 25662515 0 0 Deletion 1 FN1477-S Chr7 10101396 10101397 0 0 Deletion 1 FN1477-S Chr7 10683086 10683087 0 0 Deletion 1 LOC_Os07g18050 RNA-binding motif protein, putative, expressed FN1477-S Chr7 11222425 11222426 0 0 Deletion 1 LOC_Os07g18944 expressed protein FN1477-S Chr7 12809230 12809230 0 0 Insertion 3 FN1477-S Chr7 1431570 1431572 0 0 Deletion 2 FN1477-S Chr7 28349841 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1477-S Chr7 3937122 3937122 0 0 Insertion 2 FN1477-S Chr7 427694 427695 0 0 Deletion 1 LOC_Os07g01710 phytosulfokine receptor precursor, putative, expressed FN1477-S Chr7 9206457 9206457 0 0 Insertion 1 FN1477-S Chr7 9254972 A-G 0 0 Single Base Substitution 0 INTRON HET FN1477-S Chr7 9663993 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1477-S Chr8 13046817 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr8 17414417 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr8 18164358 18164358 0 0 Insertion 2 FN1477-S Chr8 18386255 18386256 0 0 Deletion 1 LOC_Os08g29930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1477-S Chr8 25436797 25436807 0 0 Deletion 10 FN1477-S Chr8 2656931 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1477-S Chr8 8727974 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1477-S Chr9 11201987 11201993 0 0 Deletion 6 LOC_Os09g18250 expressed protein FN1477-S Chr9 16323601 16323608 0 0 Deletion 7 FN1477-S Chr9 4349164 4349165 0 0 Deletion 1 FN1477-S Chr9 7691761 7691795 0 0 Deletion 34 FN1477-S Chr9 8212198 A-G 0 0 Single Base Substitution 0 INTERGENIC HET