FN1478-S Chr1 16649328 16649328 0 0 Insertion 16 FN1478-S Chr1 35322221 T-C 0 0 Single Base Substitution 0 INTRON HET FN1478-S Chr1 38794355 38794379 0 0 Deletion 24 FN1478-S Chr1 39539917 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1478-S Chr1 7845313 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr1 8030658 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr1 8305887 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1478-S Chr10 22744208 22744209 0 0 Deletion 1 FN1478-S Chr10 327999 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr10 4855331 4855332 0 0 Deletion 1 FN1478-S Chr10 5332346 5332346 0 0 Insertion 2 FN1478-S Chr10 9069847 9069852 0 0 Deletion 5 FN1478-S Chr11 16262716 16262716 0 0 Insertion 1 FN1478-S Chr11 2147809 Chr8 2064292 0 Translocation 0 LOC_Os08g04240 cysteine-rich repeat secretory protein 55 precursor, putative, expressed FN1478-S Chr11 2147809 Chr8 2064292 0 Translocation 0 LOC_Os11g04990 expressed protein FN1478-S Chr11 2148049 Chr8 2064210 0 Translocation 0 LOC_Os08g04240 cysteine-rich repeat secretory protein 55 precursor, putative, expressed FN1478-S Chr11 2148049 Chr8 2064210 0 Translocation 0 LOC_Os11g04990 expressed protein FN1478-S Chr11 27774733 27774735 0 0 Deletion 2 FN1478-S Chr11 5714599 5714601 0 0 Deletion 2 FN1478-S Chr11 5785664 5785665 0 0 Deletion 1 FN1478-S Chr11 6813044 6813044 0 0 Insertion 1 FN1478-S Chr11 9333840 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr12 1529355 A-T 0 0 Single Base Substitution 0 INTRON HET FN1478-S Chr12 19927565 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1478-S Chr12 6579285 6579286 0 0 Deletion 1 FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16440 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16450 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16460 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16470 hypothetical protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16480 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16490 transposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16500 transposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16510 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16520 wall-associated receptor kinase 3 precursor, putative, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16524 glutaredoxin-C8 precursor, putative, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16530 hypothetical protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16540 OsWAK124 - OsWAK receptor-like protein OsWAK-RLP, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16550 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16570 hypothetical protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16580 transposon protein, putative, CACTA, En/Spm sub-class FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16590 transposon protein, putative, Mariner sub-class, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16600 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16610 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16620 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16630 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16640 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16650 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16660 hypothetical protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16670 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16680 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16690 zinc finger, C3HC4 type domain containing protein, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16720 cytochrome P450 71A1, putative, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16750 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16760 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16770 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16790 transposon protein, putative, CACTA, En/Spm sub-class FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16820 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16870 expressed protein FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16880 PROLM27 - Prolamin precursor, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16890 PROLM28 - Prolamin precursor, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16930 retrotransposon protein, putative, Ty3-gypsy subclass FN1478-S Chr12 9414259 9712973 0 0 Tandem-Duplication 298714 LOC_Os12g16950 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr12 9522960 10254739 0 0 Inversion 731779 LOC_Os12g17880 armadillo/beta-catenin repeat protein-related, putative, expressed FN1478-S Chr12 9522971 9606766 0 0 Inversion 83795 FN1478-S Chr2 1211243 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1478-S Chr2 16025743 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g27230 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr3 12355782 G-A 0 0 Single Base Substitution 0 INTRON HET FN1478-S Chr3 17397589 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr3 1999064 1999064 0 0 Insertion 2 FN1478-S Chr3 27738919 Chr1 11612766 0 Translocation 0 LOC_Os03g48660 DUF1336 domain containing protein, expressed FN1478-S Chr3 27738924 Chr1 11620913 0 Translocation 0 LOC_Os01g20840 lipase class 3 family protein, putative, expressed FN1478-S Chr3 27738924 Chr1 11620913 0 Translocation 0 LOC_Os03g48660 DUF1336 domain containing protein, expressed FN1478-S Chr4 1169406 1372477 0 0 Inversion 203071 LOC_Os04g03230 retrotransposon protein, putative, unclassified FN1478-S Chr4 13700494 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr4 13970121 13970122 0 0 Deletion 1 FN1478-S Chr4 19818159 19818161 0 0 Deletion 2 FN1478-S Chr4 22859680 22859681 0 0 Deletion 1 FN1478-S Chr4 2359536 2359536 0 0 Insertion 2 FN1478-S Chr4 26443891 26443891 0 0 Insertion 2 FN1478-S Chr4 31777671 31777673 0 0 Deletion 2 LOC_Os04g53360 expressed protein FN1478-S Chr4 3947226 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr5 1130222 1130228 0 0 Deletion 6 LOC_Os05g03000 inner membrane protein alx, putative, expressed FN1478-S Chr5 1308231 1308233 0 0 Deletion 2 LOC_Os05g03230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr5 15711293 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr5 16822508 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1478-S Chr5 18638646 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr5 20583019 20583020 0 0 Deletion 1 LOC_Os05g34680 expressed protein FN1478-S Chr5 23723271 G-A 0 0 Single Base Substitution 0 INTRON HET FN1478-S Chr5 29396564 29396568 0 0 Deletion 4 FN1478-S Chr5 6539473 6539474 0 0 Deletion 1 FN1478-S Chr5 9222825 9222826 0 0 Deletion 1 LOC_Os05g16280 transposon protein, putative, unclassified, expressed FN1478-S Chr6 10263451 10263452 0 0 Deletion 1 FN1478-S Chr6 1107683 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr6 16123780 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1478-S Chr6 16306382 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1478-S Chr6 17656121 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g30520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr6 20553686 20553687 0 0 Deletion 1 FN1478-S Chr6 20860801 20860801 0 0 Insertion 3 LOC_Os06g35740 expressed protein FN1478-S Chr6 22422828 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1478-S Chr6 24848222 24848226 0 0 Deletion 4 FN1478-S Chr6 24911544 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr6 27481958 27481997 0 0 Deletion 39 FN1478-S Chr6 316828 316844 0 0 Deletion 16 FN1478-S Chr6 4198673 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr6 5419944 5419944 0 0 Insertion 1 FN1478-S Chr6 5489616 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr6 6645585 6645587 0 0 Deletion 2 FN1478-S Chr6 8803213 8803213 0 0 Insertion 1 FN1478-S Chr7 122496 122505 0 0 Deletion 9 LOC_Os07g01214 transposon protein, putative, unclassified, expressed FN1478-S Chr7 12759632 12792462 0 0 Inversion 32830 LOC_Os07g22640 lipid binding protein, putative, expressed FN1478-S Chr7 12759655 12792467 0 0 Inversion 32812 LOC_Os07g22640 lipid binding protein, putative, expressed FN1478-S Chr7 14428825 14428831 0 0 Deletion 6 FN1478-S Chr7 15569822 15569833 0 0 Deletion 11 FN1478-S Chr7 2024457 G-T 0 0 Single Base Substitution 0 INTRON HET FN1478-S Chr7 20918402 20918403 0 0 Deletion 1 FN1478-S Chr7 23329227 23329241 0 0 Deletion 14 FN1478-S Chr7 2562317 2562318 0 0 Deletion 1 LOC_Os07g05490 transposon protein, putative, CACTA, En/Spm sub-class FN1478-S Chr7 26871529 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g45030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1478-S Chr7 28667755 28667756 0 0 Deletion 1 LOC_Os07g48000 retrotransposon protein, putative, unclassified, expressed FN1478-S Chr8 11991730 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr8 18535036 18535062 0 0 Deletion 26 FN1478-S Chr8 27921511 G-T 0 0 Single Base Substitution 0 INTRON Homo FN1478-S Chr8 3586676 3586677 0 0 Deletion 1 FN1478-S Chr8 6685630 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1478-S Chr8 8388697 8388699 0 0 Deletion 2 FN1478-S Chr9 12002210 12002250 0 0 Deletion 40 FN1478-S Chr9 15981203 15981204 0 0 Deletion 1 FN1478-S Chr9 6868776 6868777 0 0 Deletion 1