FN1486-S Chr1 10550916 10550926 0 0 Deletion 10 LOC_Os01g18710 hypothetical protein FN1486-S Chr1 1158764 1158765 0 0 Deletion 1 FN1486-S Chr1 1346893 1346895 0 0 Deletion 2 FN1486-S Chr1 16857215 16857216 0 0 Deletion 1 FN1486-S Chr1 18952282 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1486-S Chr1 20592598 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1486-S Chr1 23871836 23871845 0 0 Deletion 9 FN1486-S Chr1 23955555 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1486-S Chr1 27155565 27155581 0 0 Deletion 16 LOC_Os01g47510 retrotransposon protein, putative, unclassified, expressed FN1486-S Chr1 4064264 T-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1486-S Chr1 8000609 8000610 0 0 Deletion 1 FN1486-S Chr10 13174333 13174336 0 0 Deletion 3 FN1486-S Chr10 13666021 13666023 0 0 Deletion 2 FN1486-S Chr10 14582535 14582537 0 0 Deletion 2 FN1486-S Chr10 23003746 23003746 0 0 Insertion 1 FN1486-S Chr10 7904600 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1486-S Chr11 10444927 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1486-S Chr11 12116006 12121053 0 0 Deletion 5047 FN1486-S Chr11 27749721 27749721 0 0 Insertion 1 FN1486-S Chr11 5432253 5432255 0 0 Deletion 2 FN1486-S Chr11 6279208 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1486-S Chr12 1386438 Chr3 36261811 0 Translocation 0 FN1486-S Chr12 1386446 Chr3 36255983 0 Translocation 0 FN1486-S Chr12 17873985 17873986 0 0 Deletion 1 FN1486-S Chr12 27405758 Chr5 29716727 0 Translocation 0 FN1486-S Chr12 3823673 3823673 0 0 Insertion 1 FN1486-S Chr12 5559796 5559796 0 0 Insertion 5 FN1486-S Chr2 13607936 13607937 0 0 Deletion 1 FN1486-S Chr2 16641400 16641402 0 0 Deletion 2 FN1486-S Chr2 18849444 18849445 0 0 Deletion 1 LOC_Os02g31910 potassium transporter, putative, expressed FN1486-S Chr2 26525125 26525132 0 0 Deletion 7 LOC_Os02g43940 AP2 domain containing protein, expressed FN1486-S Chr2 27730411 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1486-S Chr2 31879942 31879942 0 0 Insertion 1 LOC_Os02g52090 retrotransposon protein, putative, unclassified, expressed FN1486-S Chr3 1568946 1568948 0 0 Deletion 2 LOC_Os03g03590 transporter, monovalent cation:proton antiporter-2 family, putative, expressed FN1486-S Chr3 18700891 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g32650 transposon protein, putative, unclassified, expressed FN1486-S Chr3 21019254 21019262 0 0 Deletion 8 FN1486-S Chr3 21993727 21993734 0 0 Deletion 7 FN1486-S Chr3 32667530 32667535 0 0 Deletion 5 FN1486-S Chr3 36255974 36262100 0 0 Deletion 6126 LOC_Os03g64170 GDSL-like lipase/acylhydrolase, putative, expressed FN1486-S Chr4 1562404 1562410 0 0 Deletion 6 LOC_Os04g03579 protein kinase, putative, expressed FN1486-S Chr4 24456019 24456019 0 0 Insertion 39 LOC_Os04g41220 transposon protein, putative, unclassified, expressed FN1486-S Chr4 33974899 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g56990 Myb-like DNA-binding domain containing protein, putative, expressed FN1486-S Chr4 9988311 9988316 0 0 Deletion 5 FN1486-S Chr5 14207031 15142218 0 0 Inversion 935187 LOC_Os05g26040 pumilio-family RNA binding repeat containing protein, expressed FN1486-S Chr5 15096885 15136892 0 0 Inversion 40007 LOC_Os05g25990 expressed protein FN1486-S Chr5 15096885 15136892 0 0 Inversion 40007 LOC_Os05g26040 pumilio-family RNA binding repeat containing protein, expressed FN1486-S Chr5 21789146 21965457 0 0 Inversion 176311 LOC_Os05g37520 expressed protein FN1486-S Chr5 21789162 21965453 0 0 Inversion 176291 LOC_Os05g37520 expressed protein FN1486-S Chr5 22246987 22246987 0 0 Insertion 3 FN1486-S Chr5 25731910 26053352 0 0 Inversion 321442 LOC_Os05g44810 OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed FN1486-S Chr5 7693354 7693356 0 0 Deletion 2 FN1486-S Chr5 8377505 8377508 0 0 Deletion 3 FN1486-S Chr6 10247645 10247646 0 0 Deletion 1 FN1486-S Chr6 17416268 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1486-S Chr6 18110050 C-G 0 0 Single Base Substitution 0 INTRON HET FN1486-S Chr6 25260029 25260029 0 0 Insertion 1 FN1486-S Chr6 3372778 Chr3 36261822 0 Translocation 0 FN1486-S Chr6 3372781 Chr3 36262140 0 Translocation 0 FN1486-S Chr6 803599 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1486-S Chr7 12674433 12674433 0 0 Insertion 2 FN1486-S Chr7 16461251 16461252 0 0 Deletion 1 FN1486-S Chr7 17941359 17941361 0 0 Deletion 2 FN1486-S Chr7 1841220 1841221 0 0 Deletion 1 FN1486-S Chr7 26857944 26858027 0 0 Deletion 83 FN1486-S Chr8 12012720 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1486-S Chr8 20093904 20093908 0 0 Deletion 4 LOC_Os08g32450 hypothetical protein FN1486-S Chr8 7181719 7181720 0 0 Deletion 1 FN1486-S Chr8 7391381 7391382 0 0 Deletion 1 FN1486-S Chr9 15903475 15903483 0 0 Deletion 8 FN1486-S Chr9 18353780 18353783 0 0 Deletion 3 FN1486-S Chr9 19253151 22055212 0 0 Inversion 2802061 LOC_Os09g38330 MORN repeat domain containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37600 lysM domain-containing GPI-anchored protein precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37610 MATE efflux protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37620 flavin-containing monooxygenase family protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37630 transposon protein, putative, unclassified, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37640 purine permease, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37650 flavin-containing monooxygenase family protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37660 retrotransposon protein, putative, unclassified, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37670 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37680 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37690 flavin-containing monooxygenase family protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37700 proteophosphoglycan ppg4, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37710 NIN, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37720 RNA recognition motif containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37730 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37740 ribosomal L18p/L5e family protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37750 hypothetical protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37760 bromodomain domain containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37770 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37780 serine/threonine-protein kinase receptor precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37790 S-locus-specific glycoprotein S13 precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37800 serine/threonine kinase, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37810 S-locus-specific glycoprotein precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37820 transposon protein, putative, unclassified, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37830 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37834 serine/threonine-protein kinase receptor precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37840 carbohydrate binding protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37850 retrotransposon protein, putative, unclassified, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37860 NOL1/NOP2/sun family protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37870 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37880 serine/threonine-protein kinase receptor precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37890 serine/threonine-protein kinase receptor precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37910 HMG1/2, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37920 helicase, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37930 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37940 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37949 serine/threonine-protein kinase SRPK1, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37958 cupin domain containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37967 cupin domain containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37976 cupin domain containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g37990 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38000 no apical meristem protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38010 no apical meristem protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38020 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38030 UTP--glucose-1-phosphate uridylyltransferase, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38040 hydrolase, NUDIX family protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38050 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38060 nicotinate-nucleotide pyrophosphorylase, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38070 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38080 retrotransposon protein, putative, unclassified, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38090 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38100 phosphate carrier protein, mitochondrial precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38104 hypothetical protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38110 RING-H2 finger protein, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38120 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38130 auxin efflux carrier component, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38150 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38170 expressed protein FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38200 retrotransposon protein, putative, unclassified, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38210 auxin efflux carrier component, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38239 sulfotransferase domain containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38268 RNA polymerase IV largest subunit, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38300 OsFBK20 - F-box domain and kelch repeat containing protein, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38310 pentatricopeptide, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38320 phytoene synthase, chloroplast precursor, putative, expressed FN1486-S Chr9 21678001 22055000 0 0 Deletion 377000 LOC_Os09g38330 MORN repeat domain containing protein, expressed FN1486-S Chr9 5155636 5155640 0 0 Deletion 4 FN1486-S Chr9 5999152 5999173 0 0 Deletion 21 FN1486-S Chr9 6117831 7764553 0 0 Inversion 1646722 LOC_Os09g11020 NBS-LRR disease resistance protein, putative, expressed FN1486-S Chr9 6117839 Chr5 706256 0 Translocation 0 LOC_Os09g11020 NBS-LRR disease resistance protein, putative, expressed FN1486-S Chr9 6200460 Chr5 706258 0 Translocation 0 FN1486-S Chr9 6200487 7764554 0 0 Inversion 1564067 FN1486-S Chr9 7034405 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1486-S Chr9 7429361 7429368 0 0 Deletion 7 FN1486-S Chr9 7768761 7768764 0 0 Deletion 3