FN1512-S Chr1 10148008 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr1 13100576 14544224 0 0 Inversion 1443648 FN1512-S Chr1 13281792 14080273 0 0 Inversion 798481 LOC_Os01g23610 dihydrolipoyl dehydrogenase, putative, expressed FN1512-S Chr1 13281792 14080273 0 0 Inversion 798481 LOC_Os01g24980 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed FN1512-S Chr1 13667268 14544215 0 0 Inversion 876947 LOC_Os01g24260 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1512-S Chr1 16997429 16997429 0 0 Insertion 3 FN1512-S Chr1 20799529 20799539 0 0 Deletion 10 LOC_Os01g37240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1512-S Chr1 20847287 C-T 0 0 Single Base Substitution 0 INTRON HET FN1512-S Chr1 27416089 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr1 32570228 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr1 35186043 35186044 0 0 Deletion 1 LOC_Os01g60860 spotted leaf 11, putative, expressed FN1512-S Chr1 3960712 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1512-S Chr1 3967795 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr1 40330953 40330954 0 0 Deletion 1 FN1512-S Chr1 8029594 8029615 0 0 Deletion 21 FN1512-S Chr10 19118974 19118974 0 0 Insertion 1 FN1512-S Chr10 19465898 19465903 0 0 Deletion 5 FN1512-S Chr10 5320508 5320509 0 0 Deletion 1 FN1512-S Chr11 10338458 T-G 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1512-S Chr11 10339786 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr11 11149105 11149120 0 0 Deletion 15 FN1512-S Chr11 11769443 11769444 0 0 Deletion 1 FN1512-S Chr11 15681965 15681965 0 0 Insertion 29 FN1512-S Chr11 16970635 16970641 0 0 Deletion 6 FN1512-S Chr11 18622476 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr11 24007329 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g40249 expressed protein FN1512-S Chr11 25735787 25761999 0 0 Deletion 26212 LOC_Os11g42720 retrotransposon protein, putative, unclassified, expressed FN1512-S Chr11 25735787 25761999 0 0 Deletion 26212 LOC_Os11g42730 lipase class 3, putative, expressed FN1512-S Chr11 25735787 25761999 0 0 Deletion 26212 LOC_Os11g42740 expressed protein FN1512-S Chr11 25735787 25761999 0 0 Deletion 26212 LOC_Os11g42750 retrotransposon protein, putative, unclassified, expressed FN1512-S Chr11 25735787 25761999 0 0 Deletion 26212 LOC_Os11g42760 expressed protein FN1512-S Chr11 25735787 25761999 0 0 Deletion 26212 LOC_Os11g42770 Leucine Rich Repeat family protein, expressed FN1512-S Chr11 28621734 28621735 0 0 Deletion 1 LOC_Os11g47443 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1512-S Chr11 28884331 28884334 0 0 Deletion 3 FN1512-S Chr11 28995722 T-C 0 0 Single Base Substitution 0 INTRON HET FN1512-S Chr12 12677782 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr12 21360302 21360302 0 0 Insertion 1 FN1512-S Chr12 26546719 26546719 0 0 Insertion 4 FN1512-S Chr12 27177418 27177418 0 0 Insertion 5 FN1512-S Chr12 4406968 4406973 0 0 Deletion 5 FN1512-S Chr12 9213418 9213420 0 0 Deletion 2 FN1512-S Chr2 11770611 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr2 11770634 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr2 1894936 1894939 0 0 Deletion 3 FN1512-S Chr2 19568211 19568216 0 0 Deletion 5 FN1512-S Chr2 23761073 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr2 27115408 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr2 33059367 33059389 0 0 Deletion 22 FN1512-S Chr2 34049971 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr2 6329556 6329556 0 0 Insertion 4 FN1512-S Chr3 1038935 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr3 12667394 12667394 0 0 Insertion 1 FN1512-S Chr3 1519 1519 0 0 Insertion 76 FN1512-S Chr3 1797843 1860065 0 0 Inversion 62222 FN1512-S Chr3 18733812 18733814 0 0 Deletion 2 FN1512-S Chr3 21149145 21149150 0 0 Deletion 5 FN1512-S Chr3 23423067 23423067 0 0 Insertion 4 FN1512-S Chr3 26394529 27056321 0 0 Inversion 661792 FN1512-S Chr3 346461 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1512-S Chr4 12407648 A-G 0 0 Single Base Substitution 0 INTRON HET FN1512-S Chr4 17503578 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g29440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1512-S Chr4 26408317 26408330 0 0 Deletion 13 FN1512-S Chr4 26627926 26627929 0 0 Deletion 3 FN1512-S Chr4 26806501 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1512-S Chr4 29231856 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g49040 retrotransposon protein, putative, unclassified, expressed FN1512-S Chr4 29231874 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g49040 retrotransposon protein, putative, unclassified, expressed FN1512-S Chr5 20022563 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr5 20352628 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr5 22246987 22246987 0 0 Insertion 3 FN1512-S Chr5 26892035 26892053 0 0 Deletion 18 FN1512-S Chr5 5767505 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr6 14916251 14916253 0 0 Deletion 2 FN1512-S Chr6 16595957 T-A 0 0 Single Base Substitution 0 INTRON Homo FN1512-S Chr6 19914425 19914426 0 0 Deletion 1 FN1512-S Chr6 20565593 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr6 27824822 A-G 0 0 Single Base Substitution 0 INTRON HET FN1512-S Chr6 30380626 T-A 0 0 Single Base Substitution 0 INTRON HET FN1512-S Chr6 31199284 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr6 863078 863084 0 0 Deletion 6 FN1512-S Chr7 12326589 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g22050 retrotransposon, putative, centromere-specific FN1512-S Chr7 13176159 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr7 19847195 19847196 0 0 Deletion 1 FN1512-S Chr7 20116368 20912768 0 0 Inversion 796400 LOC_Os07g33670 patatin-like phospholipase family protein, expressed FN1512-S Chr7 20116368 20912768 0 0 Inversion 796400 LOC_Os07g34890 expressed protein FN1512-S Chr7 20728504 20728504 0 0 Insertion 73 FN1512-S Chr7 21347112 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr7 21365721 G-A 0 0 Single Base Substitution 0 INTRON HET FN1512-S Chr7 23382986 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr7 26828986 26828986 0 0 Insertion 1 FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06274 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06300 ethylene-insensitive protein 2, putative, expressed FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06315 expressed protein FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06325 retrotransposon protein, putative, unclassified FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06335 hypothetical protein FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06345 expressed protein FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06355 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1512-S Chr7 3055001 3105000 0 0 Deletion 50000 LOC_Os07g06380 peroxidase precursor, putative, expressed FN1512-S Chr8 12722234 12722234 0 0 Insertion 51 FN1512-S Chr8 13612653 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1512-S Chr8 17647013 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31870 cell division cycle protein 48, putative, expressed FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31880 expressed protein FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31890 expressed protein FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31900 amino acid transporter protein, putative, expressed FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31910 expressed protein FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31920 retrotransposon protein, putative, unclassified, expressed FN1512-S Chr8 19749001 19798000 0 0 Deletion 49000 LOC_Os08g31930 BRCA1 C Terminus domain containing protein, expressed FN1512-S Chr8 20325970 20325971 0 0 Deletion 1 FN1512-S Chr8 27417099 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr9 10399185 10399186 0 0 Deletion 1 FN1512-S Chr9 16211592 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1512-S Chr9 1682579 1682580 0 0 Deletion 1 FN1512-S Chr9 17644037 17644046 0 0 Deletion 9 FN1512-S Chr9 21756106 21756112 0 0 Deletion 6 FN1512-S Chr9 5495925 A-T 0 0 Single Base Substitution 0 INTERGENIC HET