FN1516-S Chr1 1106556 1106556 0 0 Insertion 1 LOC_Os01g02960 expressed protein FN1516-S Chr1 20584427 20584429 0 0 Deletion 2 FN1516-S Chr1 2187920 2187921 0 0 Deletion 1 LOC_Os01g04780 retrotransposon protein, putative, unclassified, expressed FN1516-S Chr1 23925481 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1516-S Chr1 33133950 33133954 0 0 Deletion 4 FN1516-S Chr1 37280819 37280825 0 0 Deletion 6 FN1516-S Chr1 40015583 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr1 40238067 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1516-S Chr1 8064233 8064235 0 0 Deletion 2 FN1516-S Chr1 8067011 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g14420 RWP-RK domain-containing protein, putative, expressed FN1516-S Chr10 11296815 11296815 0 0 Insertion 4 FN1516-S Chr10 14604688 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr10 14758535 14758536 0 0 Deletion 1 FN1516-S Chr10 7034983 7034983 0 0 Insertion 6 FN1516-S Chr11 11264977 11264987 0 0 Deletion 10 FN1516-S Chr11 12297659 12297659 0 0 Insertion 38 FN1516-S Chr11 13862778 13862779 0 0 Deletion 1 FN1516-S Chr11 15504954 15504955 0 0 Deletion 1 FN1516-S Chr12 11468824 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1516-S Chr12 15356719 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26310 retrotransposon protein, putative, unclassified, expressed FN1516-S Chr12 20367485 20367486 0 0 Deletion 1 FN1516-S Chr12 25599175 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr12 25599176 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr12 4115463 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr12 5788951 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr12 9423591 9423599 0 0 Deletion 8 LOC_Os12g16450 retrotransposon protein, putative, unclassified, expressed FN1516-S Chr2 10738237 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr2 10902876 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr2 22163189 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr2 26991086 26991107 0 0 Deletion 21 FN1516-S Chr2 27818252 27818253 0 0 Deletion 1 LOC_Os02g45720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1516-S Chr2 6114433 6114439 0 0 Deletion 6 LOC_Os02g11820 GTPase-activating protein, putative, expressed FN1516-S Chr2 8481912 8481921 0 0 Deletion 9 FN1516-S Chr3 12222693 12222694 0 0 Deletion 1 FN1516-S Chr3 14119638 C-A 0 0 Single Base Substitution 0 INTRON Homo FN1516-S Chr3 15609684 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr3 21047348 21047349 0 0 Deletion 1 FN1516-S Chr3 22661045 22842348 0 0 Inversion 181303 LOC_Os03g40725 expressed protein FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g40970 retrotransposon protein, putative, unclassified, expressed FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g40980 retrotransposon protein, putative, Ty3-gypsy subclass FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41000 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41010 hypothetical protein FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41030 expressed protein FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41050 expressed protein FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41060 GASR2 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative, expressed FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41064 natural resistance-associated macrophage protein, putative, expressed FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41070 metal transporter Nramp2, putative, expressed FN1516-S Chr3 22770001 22842000 0 0 Deletion 72000 LOC_Os03g41080 seed maturation protein PM23, putative, expressed FN1516-S Chr3 23427662 23427663 0 0 Deletion 1 FN1516-S Chr3 24154913 24154913 0 0 Insertion 3 FN1516-S Chr3 26372540 26372541 0 0 Deletion 1 LOC_Os03g46590 transposon protein, putative, unclassified, expressed FN1516-S Chr3 3721770 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr3 5068311 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr3 5331423 5331427 0 0 Deletion 4 LOC_Os03g10478 glycosyl hydrolase family 10 protein, putative, expressed FN1516-S Chr3 5431428 G-A 0 0 Single Base Substitution 0 INTRON HET FN1516-S Chr4 15242428 T-G 0 0 Single Base Substitution 0 INTRON Homo FN1516-S Chr4 18650222 18650226 0 0 Deletion 4 FN1516-S Chr4 19484078 19484105 0 0 Deletion 27 LOC_Os04g32470 expressed protein FN1516-S Chr4 20111015 20111015 0 0 Insertion 71 FN1516-S Chr4 25113079 25113080 0 0 Deletion 1 FN1516-S Chr4 26353955 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr4 26725853 26725854 0 0 Deletion 1 FN1516-S Chr4 27544994 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1516-S Chr4 277372 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g01370 retrotransposon protein, putative, Ty3-gypsy subclass FN1516-S Chr4 9270412 9270432 0 0 Deletion 20 FN1516-S Chr5 11475435 11475438 0 0 Deletion 3 FN1516-S Chr5 24840063 24896788 0 0 Inversion 56725 LOC_Os05g42410 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1516-S Chr5 4281740 4281745 0 0 Deletion 5 FN1516-S Chr5 8955269 8955274 0 0 Deletion 5 FN1516-S Chr6 12949651 12949652 0 0 Deletion 1 FN1516-S Chr6 19628509 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr6 20609623 20609632 0 0 Deletion 9 FN1516-S Chr6 24915674 24915675 0 0 Deletion 1 FN1516-S Chr6 26102884 26102887 0 0 Deletion 3 FN1516-S Chr6 427663 427664 0 0 Deletion 1 LOC_Os06g01730 DNA ligase I, putative, expressed FN1516-S Chr6 6968587 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1516-S Chr6 8155492 8227878 0 0 Inversion 72386 LOC_Os06g14510 glucose-6-phosphate isomerase, putative, expressed FN1516-S Chr7 10791173 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1516-S Chr7 18260666 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g30850 retrotransposon protein, putative, Ty3-gypsy subclass FN1516-S Chr7 27994281 27994282 0 0 Deletion 1 FN1516-S Chr7 28510712 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr7 6976148 6976170 0 0 Deletion 22 FN1516-S Chr8 10116074 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr8 1840471 1840471 0 0 Insertion 71 LOC_Os08g03860 expressed protein FN1516-S Chr8 19668533 T-G 0 0 Single Base Substitution 0 INTRON HET FN1516-S Chr8 22068428 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr8 23667308 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1516-S Chr8 25797826 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1516-S Chr9 14265569 14265569 0 0 Insertion 3 LOC_Os09g23920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1516-S Chr9 16116159 16116161 0 0 Deletion 2 FN1516-S Chr9 17265060 17265060 0 0 Insertion 1 FN1516-S Chr9 7043915 7043916 0 0 Deletion 1 FN1516-S Chr9 8846809 8846884 0 0 Deletion 75 LOC_Os09g14840 retrotransposon protein, putative, unclassified, expressed