FN1520-S Chr1 1021042 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr1 10687892 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr1 21109752 21109752 0 0 Insertion 1 FN1520-S Chr1 21579724 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr1 23374031 23374033 0 0 Deletion 2 FN1520-S Chr1 33808456 33808456 0 0 Insertion 1 FN1520-S Chr1 5742858 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr1 614200 614200 0 0 Insertion 2 FN1520-S Chr1 7011799 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr1 8603585 8603589 0 0 Deletion 4 FN1520-S Chr10 11306101 11306127 0 0 Deletion 26 FN1520-S Chr10 16619948 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr10 18605258 18605258 0 0 Insertion 60 FN1520-S Chr10 23136211 G-A 0 0 Single Base Substitution 0 INTRON HET FN1520-S Chr10 3913792 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr10 4020363 5748094 0 0 Inversion 1727731 LOC_Os10g10460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1520-S Chr10 8593880 8593886 0 0 Deletion 6 FN1520-S Chr11 10099862 A-T 0 0 Single Base Substitution 0 INTRON HET FN1520-S Chr11 16837354 16837359 0 0 Deletion 5 FN1520-S Chr11 18849627 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g31990 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr11 19162602 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g32460 expressed protein FN1520-S Chr11 19323632 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr11 21750289 21750294 0 0 Deletion 5 LOC_Os11g36870 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr11 2640177 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr11 4891997 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr11 9520059 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr11 9520065 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr11 976346 976358 0 0 Deletion 12 LOC_Os11g02880 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr12 10206227 10206227 0 0 Insertion 20 FN1520-S Chr12 14513032 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr12 14886789 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr12 16120308 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr12 16686033 16686033 0 0 Insertion 22 FN1520-S Chr12 17686052 G-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1520-S Chr12 17751718 17751720 0 0 Deletion 2 FN1520-S Chr12 20905699 20905699 0 0 Insertion 1 FN1520-S Chr12 24075311 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr12 24123683 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN1520-S Chr12 24123684 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN1520-S Chr12 2943371 A-G 0 0 Single Base Substitution 0 INTRON Homo FN1520-S Chr12 6589764 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr2 12282594 12282595 0 0 Deletion 1 LOC_Os02g20800 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr2 12443646 G-T 0 0 Single Base Substitution 0 INTRON HET FN1520-S Chr2 15458467 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr2 17154389 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr2 21439399 21439399 0 0 Insertion 30 FN1520-S Chr2 22818437 22832536 0 0 Deletion 14099 LOC_Os02g37830 protein kinase domain containing protein, expressed FN1520-S Chr2 30818796 30818798 0 0 Deletion 2 FN1520-S Chr2 32232513 32232514 0 0 Deletion 1 FN1520-S Chr2 8657254 8657255 0 0 Deletion 1 FN1520-S Chr3 20936229 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr3 22297431 22297431 0 0 Insertion 8 FN1520-S Chr3 22400220 22400220 0 0 Insertion 2 LOC_Os03g40290 expressed protein FN1520-S Chr3 22911816 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g41200 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr3 24236087 24236090 0 0 Deletion 3 FN1520-S Chr3 28794338 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr3 29835497 29835499 0 0 Deletion 2 FN1520-S Chr3 30041650 30041651 0 0 Deletion 1 LOC_Os03g52310 transposon protein, putative, unclassified, expressed FN1520-S Chr3 8812657 8812668 0 0 Deletion 11 FN1520-S Chr4 13209137 13209139 0 0 Deletion 2 FN1520-S Chr4 14439008 14439010 0 0 Deletion 2 FN1520-S Chr4 1453867 1453867 0 0 Insertion 6 FN1520-S Chr4 1476174 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr4 15295801 15295801 0 0 Insertion 1 FN1520-S Chr4 18648967 18648997 0 0 Deletion 30 FN1520-S Chr4 24031368 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr4 24031369 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr4 27777733 27777738 0 0 Deletion 5 FN1520-S Chr4 28047568 28047568 0 0 Insertion 4 FN1520-S Chr4 3985183 3985183 0 0 Insertion 1 FN1520-S Chr4 573495 573496 0 0 Deletion 1 FN1520-S Chr4 9669753 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr5 10226319 G-A 0 0 Single Base Substitution 0 INTRON HET FN1520-S Chr5 14655951 14655963 0 0 Deletion 12 FN1520-S Chr5 16335516 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr5 1905128 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr5 22495410 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr5 22921735 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g39090 CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1520-S Chr5 27435977 27435977 0 0 Insertion 2 FN1520-S Chr5 277569 277569 0 0 Insertion 3 FN1520-S Chr5 27970421 27970422 0 0 Deletion 1 FN1520-S Chr5 28334844 28334860 0 0 Deletion 16 LOC_Os05g49420 transcription factor, putative, expressed FN1520-S Chr6 10003125 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr6 14629761 14629761 0 0 Insertion 2 FN1520-S Chr6 27358364 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1520-S Chr6 28877607 28877609 0 0 Deletion 2 LOC_Os06g47720 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed FN1520-S Chr6 29396167 29396167 0 0 Insertion 2 FN1520-S Chr6 6301301 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr6 6784935 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr7 11829810 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1520-S Chr7 27102847 27102848 0 0 Deletion 1 FN1520-S Chr7 27481926 27481927 0 0 Deletion 1 FN1520-S Chr7 42438 42439 0 0 Deletion 1 FN1520-S Chr7 9177152 9177155 0 0 Deletion 3 LOC_Os07g15800 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18220 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18720 retrotransposon protein, putative, unclassified FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18730 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18740 zinc knuckle family protein, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18750 conserved hypothetical protein FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18760 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18770 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18780 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18790 conserved hypothetical protein FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18800 conserved hypothetical protein FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18810 conserved hypothetical protein FN1520-S Chr8 11165001 11231000 0 0 Deletion 66000 LOC_Os08g18820 zinc knuckle family protein, expressed FN1520-S Chr8 17097732 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr8 17097733 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr8 19998614 19998614 0 0 Insertion 1 FN1520-S Chr8 6124980 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr8 6352954 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1520-S Chr9 1075650 1075650 0 0 Insertion 1 FN1520-S Chr9 12081052 T-C 0 0 Single Base Substitution 0 INTRON Homo FN1520-S Chr9 14705826 14705828 0 0 Deletion 2 FN1520-S Chr9 21517143 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g37250 high mobility group, putative, expressed FN1520-S Chr9 2422416 2431580 0 0 Inversion 9164 LOC_Os09g04540 retrotransposon protein, putative, unclassified, expressed FN1520-S Chr9 5428058 5428068 0 0 Deletion 10 LOC_Os09g09970 retrotransposon protein, putative, unclassified, expressed