FN1529-S Chr1 1970544 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr1 21079068 C-A 0 0 Single Base Substitution 0 INTRON Homo FN1529-S Chr1 2305903 2305904 0 0 Deletion 1 FN1529-S Chr1 24732405 24732411 0 0 Deletion 6 FN1529-S Chr1 28477033 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g49500 retrotransposon protein, putative, unclassified FN1529-S Chr1 32328614 32328616 0 0 Deletion 2 LOC_Os01g56140 expressed protein FN1529-S Chr1 3970267 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr1 40717859 40717867 0 0 Deletion 8 FN1529-S Chr1 413858 413878 0 0 Deletion 20 FN1529-S Chr1 7643275 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr10 11064676 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr10 13170475 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr10 13361421 13361439 0 0 Deletion 18 LOC_Os10g25780 FAD-linked oxidoreductase protein, putative, expressed FN1529-S Chr10 13658286 13668908 0 0 Deletion 10622 LOC_Os10g26340 cytochrome P450, putative, expressed FN1529-S Chr10 13658286 13668908 0 0 Deletion 10622 LOC_Os10g26360 transposon protein, putative, unclassified, expressed FN1529-S Chr10 1506208 1506209 0 0 Deletion 1 FN1529-S Chr10 15315965 15315967 0 0 Deletion 2 LOC_Os10g29490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1529-S Chr10 18899571 18899572 0 0 Deletion 1 FN1529-S Chr10 22659914 22659918 0 0 Deletion 4 FN1529-S Chr10 7209217 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g13350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1529-S Chr11 11477408 11477410 0 0 Deletion 2 LOC_Os11g19940 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr11 11700557 T-C 0 0 Single Base Substitution 0 INTRON HET FN1529-S Chr11 12121961 12121962 0 0 Deletion 1 FN1529-S Chr11 13880818 13880820 0 0 Deletion 2 FN1529-S Chr11 1435405 1435416 0 0 Deletion 11 FN1529-S Chr11 1459410 T-C 0 0 Single Base Substitution 0 INTRON HET FN1529-S Chr11 20238549 20238549 0 0 Insertion 1 FN1529-S Chr11 2286576 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr11 26598328 G-A 0 0 Single Base Substitution 0 INTRON HET FN1529-S Chr11 2663970 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr11 5590366 5590371 0 0 Deletion 5 FN1529-S Chr11 5985020 5985020 0 0 Insertion 2 FN1529-S Chr11 7218605 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr11 7391556 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr12 14486111 14486111 0 0 Insertion 16 FN1529-S Chr12 15473078 C-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1529-S Chr12 19913697 19913702 0 0 Deletion 5 FN1529-S Chr12 20042193 20042193 0 0 Insertion 2 FN1529-S Chr12 2127317 2127318 0 0 Deletion 1 FN1529-S Chr12 22013071 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr12 4806973 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr12 5067184 G-C 0 0 Single Base Substitution 0 INTRON Homo FN1529-S Chr12 8806148 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1529-S Chr2 11902042 11902042 0 0 Insertion 6 LOC_Os02g20200 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr2 14549956 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr2 15009291 15018796 0 0 Deletion 9505 FN1529-S Chr2 17870515 17870532 0 0 Deletion 17 LOC_Os02g30090 cytochrome P450, putative, expressed FN1529-S Chr2 19103820 19103825 0 0 Deletion 5 FN1529-S Chr2 23182744 23182749 0 0 Deletion 5 FN1529-S Chr2 24162610 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g39950 EF hand family protein, putative, expressed FN1529-S Chr2 25842722 25842726 0 0 Deletion 4 LOC_Os02g42950 YABBY domain containing protein, putative, expressed FN1529-S Chr2 26764132 26764137 0 0 Deletion 5 FN1529-S Chr2 28380611 28380617 0 0 Deletion 6 FN1529-S Chr2 28801392 28801404 0 0 Deletion 12 FN1529-S Chr2 28966415 28966416 0 0 Deletion 1 FN1529-S Chr2 30379228 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr2 31349834 31349834 0 0 Insertion 1 FN1529-S Chr2 9649984 9650413 0 0 Deletion 429 FN1529-S Chr3 14646876 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1529-S Chr3 18816746 18816750 0 0 Deletion 4 LOC_Os03g32900 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr3 19751257 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr3 20963787 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr3 22843833 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr3 30202574 30202574 0 0 Insertion 2 FN1529-S Chr3 33122697 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr4 2200431 2200431 0 0 Insertion 2 FN1529-S Chr4 2317867 2317867 0 0 Insertion 3 FN1529-S Chr4 26774142 26774143 0 0 Deletion 1 FN1529-S Chr4 26826213 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr4 33392453 33392461 0 0 Deletion 8 FN1529-S Chr4 416537 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr4 8035996 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1529-S Chr4 8035997 A-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os04g14340 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr4 8035998 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g14340 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr5 16375533 16375533 0 0 Insertion 2 FN1529-S Chr5 20117245 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr5 28775760 T-G 0 0 Single Base Substitution 0 INTRON Homo FN1529-S Chr5 29409129 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr5 8630461 8630464 0 0 Deletion 3 LOC_Os05g15210 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr5 9259119 9259127 0 0 Deletion 8 FN1529-S Chr6 2578162 2578167 0 0 Deletion 5 FN1529-S Chr6 27585612 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION Homo FN1529-S Chr6 28358756 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr6 7372429 7372429 0 0 Insertion 1 FN1529-S Chr7 11345382 11345385 0 0 Deletion 3 LOC_Os07g19170 expressed protein FN1529-S Chr7 12097844 G-A 0 0 Single Base Substitution 0 INTRON HET FN1529-S Chr7 12555072 12555072 0 0 Insertion 2 FN1529-S Chr7 17733164 17733175 0 0 Deletion 11 LOC_Os07g30060 retrotransposon protein, putative, unclassified, expressed FN1529-S Chr7 20125905 20125909 0 0 Deletion 4 FN1529-S Chr7 21725808 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1529-S Chr7 28451000 28451001 0 0 Deletion 1 LOC_Os07g47580 ribosomal protein, putative, expressed FN1529-S Chr7 29623321 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1529-S Chr7 6144705 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr7 6540267 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr7 9489842 9489846 0 0 Deletion 4 FN1529-S Chr8 1033578 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr8 15553662 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr8 15799798 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr8 18299962 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr8 21010455 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1529-S Chr8 24721344 24721344 0 0 Insertion 2 FN1529-S Chr8 27582403 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr8 3804896 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr8 7384957 7384974 0 0 Deletion 17 FN1529-S Chr9 1500341 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1529-S Chr9 15812027 15812033 0 0 Deletion 6 FN1529-S Chr9 18752143 18752180 0 0 Deletion 37 LOC_Os09g31170 expressed protein FN1529-S Chr9 18752143 18752180 0 0 Deletion 37 LOC_Os09g31180 ribosomal protein L6, putative, expressed FN1529-S Chr9 22924532 G-C 0 0 Single Base Substitution 0 INTRON Homo FN1529-S Chr9 4721127 4721127 0 0 Insertion 2 FN1529-S Chr9 8493339 8493340 0 0 Deletion 1