FN1538-S Chr1 10637884 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr1 12097019 12097025 0 0 Deletion 6 FN1538-S Chr1 20121555 20121555 0 0 Insertion 1 FN1538-S Chr1 23932390 23941815 0 0 Deletion 9425 LOC_Os01g42234 amino acid permease family protein, putative, expressed FN1538-S Chr1 23932390 23941815 0 0 Deletion 9425 LOC_Os01g42260 transcriptional corepressor LEUNIG, putative, expressed FN1538-S Chr1 23977260 T-C 0 0 Single Base Substitution 0 INTRON HET FN1538-S Chr1 26479235 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr1 27829075 27829079 0 0 Deletion 4 FN1538-S Chr1 32205841 32205842 0 0 Deletion 1 FN1538-S Chr10 15068091 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr10 2199069 2199077 0 0 Deletion 8 FN1538-S Chr10 22588135 22588137 0 0 Deletion 2 FN1538-S Chr10 2919680 2919680 0 0 Insertion 1 FN1538-S Chr10 3846194 3846196 0 0 Deletion 2 FN1538-S Chr10 4878777 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr10 5386645 5386651 0 0 Deletion 6 LOC_Os10g09940 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1538-S Chr10 5719152 5719153 0 0 Deletion 1 FN1538-S Chr10 5898301 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr11 15816209 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1538-S Chr11 24871543 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1538-S Chr11 25198361 25198362 0 0 Deletion 1 FN1538-S Chr11 26799973 26799973 0 0 Insertion 2 FN1538-S Chr11 6666254 6666254 0 0 Insertion 1 FN1538-S Chr11 9328462 9328465 0 0 Deletion 3 LOC_Os11g16800 expressed protein FN1538-S Chr11 9453563 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr12 21510886 21510887 0 0 Deletion 1 FN1538-S Chr12 23039621 23039621 0 0 Insertion 45 FN1538-S Chr12 24251601 G-C 0 0 Single Base Substitution 0 INTRON Homo FN1538-S Chr12 6752095 6752095 0 0 Insertion 17 FN1538-S Chr12 9864108 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr2 16873953 16879577 0 0 Deletion 5624 LOC_Os02g28520 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1538-S Chr2 2106504 2106504 0 0 Insertion 2 LOC_Os02g04680 OsSPL3 - SBP-box gene family member, expressed FN1538-S Chr2 23478053 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr2 29134244 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr2 32323204 32323208 0 0 Deletion 4 LOC_Os02g52860 phosphate carrier protein, mitochondrial precursor, putative, expressed FN1538-S Chr2 33006906 33006906 0 0 Insertion 2 FN1538-S Chr2 35175745 35175745 0 0 Insertion 2 FN1538-S Chr2 4272364 4272365 0 0 Deletion 1 FN1538-S Chr2 7718685 7718690 0 0 Deletion 5 FN1538-S Chr2 8152735 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr3 11036709 11036712 0 0 Deletion 3 FN1538-S Chr3 18673295 18673295 0 0 Insertion 1 FN1538-S Chr3 19081260 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr3 21290123 21290123 0 0 Insertion 1 FN1538-S Chr3 25577455 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1538-S Chr3 26887050 26887051 0 0 Deletion 1 FN1538-S Chr3 34371142 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr3 34885572 34885582 0 0 Deletion 10 FN1538-S Chr3 35013132 A-G 0 0 Single Base Substitution 0 INTRON HET FN1538-S Chr3 4881196 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr4 15495314 15495327 0 0 Deletion 13 FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30040 jacalin-like lectin domain containing protein, expressed FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30050 expressed protein FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30060 wall-associated receptor kinase-like 10 precursor, putative, expressed FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30070 expressed protein FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30080 retrotransposon protein, putative, Ty3-gypsy subclass FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30090 retrotransposon protein, putative, unclassified, expressed FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30100 transposon protein, putative, CACTA, En/Spm sub-class FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30110 wall-associated receptor kinase 3 precursor, putative, expressed FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30130 retrotransposon protein, putative, unclassified, expressed FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30140 expressed protein FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30150 retrotransposon protein, putative, unclassified FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30160 OsWAK46 - OsWAK receptor-like protein kinase, expressed FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30170 expressed protein FN1538-S Chr4 17931001 18014000 0 0 Deletion 83000 LOC_Os04g30180 F-box/LRR-repeat protein 14, putative, expressed FN1538-S Chr4 18352594 18352596 0 0 Deletion 2 FN1538-S Chr4 21637706 21637717 0 0 Deletion 11 FN1538-S Chr4 30875124 30875125 0 0 Deletion 1 FN1538-S Chr4 33808242 33808244 0 0 Deletion 2 FN1538-S Chr4 3404302 3404307 0 0 Deletion 5 FN1538-S Chr5 10477968 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr5 12698620 12698625 0 0 Deletion 5 FN1538-S Chr5 20921055 20921055 0 0 Insertion 2 FN1538-S Chr5 28248265 28248268 0 0 Deletion 3 FN1538-S Chr5 5878648 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr5 642590 642598 0 0 Deletion 8 FN1538-S Chr5 6701562 7084111 0 0 Inversion 382549 LOC_Os05g11790 CAMK_KIN1/SNF1/Nim1_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1538-S Chr5 6701562 7084111 0 0 Inversion 382549 LOC_Os05g12320 nodulin MtN3 family protein, putative, expressed FN1538-S Chr5 6701574 7084132 0 0 Inversion 382558 LOC_Os05g11790 CAMK_KIN1/SNF1/Nim1_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1538-S Chr5 6701574 7084132 0 0 Inversion 382558 LOC_Os05g12320 nodulin MtN3 family protein, putative, expressed FN1538-S Chr6 20471084 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr6 20971837 20971861 0 0 Deletion 24 LOC_Os06g35940 osFTL12 FT-Like12 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed FN1538-S Chr6 22681695 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38340 receptor-like protein kinase precursor, putative, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38350 expressed protein FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38360 transposon protein, putative, unclassified, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38370 expressed protein FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38380 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38390 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38400 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38430 expressed protein FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38440 expressed protein FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38450 vignain precursor, putative, expressed FN1538-S Chr6 22711001 22794000 0 0 Deletion 83000 LOC_Os06g38460 expressed protein FN1538-S Chr6 2755843 2755845 0 0 Deletion 2 FN1538-S Chr6 5405356 T-C 0 0 Single Base Substitution 0 INTRON Homo FN1538-S Chr6 5407426 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr7 21699879 21699879 0 0 Insertion 22 FN1538-S Chr7 22869154 22869155 0 0 Deletion 1 FN1538-S Chr7 28425797 28425797 0 0 Insertion 1 FN1538-S Chr7 3369605 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g06890 FAD-linked oxidoreductase protein, putative, expressed FN1538-S Chr8 12707210 12707211 0 0 Deletion 1 FN1538-S Chr8 14440936 14440936 0 0 Insertion 1 FN1538-S Chr8 16743012 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr8 19854187 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1538-S Chr8 21900832 21900890 0 0 Deletion 58 FN1538-S Chr8 27263915 27263916 0 0 Deletion 1 FN1538-S Chr8 7381911 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1538-S Chr8 8652050 8652130 0 0 Deletion 80 FN1538-S Chr8 987974 987976 0 0 Deletion 2 FN1538-S Chr9 12576803 12576816 0 0 Deletion 13 FN1538-S Chr9 13581219 13581221 0 0 Deletion 2 LOC_Os09g22510 expressed protein FN1538-S Chr9 1684862 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1538-S Chr9 1684863 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g03410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1538-S Chr9 17849630 17849647 0 0 Deletion 17 FN1538-S Chr9 18205026 18205036 0 0 Deletion 10 FN1538-S Chr9 20618435 20618444 0 0 Deletion 9