FN1540-S Chr1 11777722 11777736 0 0 Deletion 14 FN1540-S Chr1 12362031 12362031 0 0 Insertion 4 FN1540-S Chr1 2377850 2377850 0 0 Insertion 6 LOC_Os01g05064 expressed protein FN1540-S Chr1 30816716 30817736 0 0 Deletion 1020 FN1540-S Chr1 31626963 31626964 0 0 Deletion 1 FN1540-S Chr1 37110353 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr1 41132865 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1540-S Chr1 5357247 5357251 0 0 Deletion 4 FN1540-S Chr1 8151655 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr10 7138490 7138490 0 0 Insertion 1 FN1540-S Chr11 10934850 10934866 0 0 Deletion 16 FN1540-S Chr11 1140651 1140652 0 0 Deletion 1 FN1540-S Chr11 12766849 12766852 0 0 Deletion 3 FN1540-S Chr11 12835720 12835725 0 0 Deletion 5 FN1540-S Chr11 12853748 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr11 14321747 Chr8 12353778 0 Translocation 0 LOC_Os08g20570 chloride channel protein, putative, expressed FN1540-S Chr11 14321786 Chr8 12355101 0 Translocation 0 LOC_Os08g20570 chloride channel protein, putative, expressed FN1540-S Chr11 14940458 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g26110 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr11 18637846 18637847 0 0 Deletion 1 FN1540-S Chr11 21050437 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1540-S Chr11 21417941 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr11 26671416 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr11 27388322 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g45250 ribonucleases P/MRP protein subunit POP1 containing protein, expressed FN1540-S Chr11 9350055 G-T 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr12 10743748 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr12 11108140 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g19130 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr12 17386184 Chr8 17758594 0 Translocation 0 FN1540-S Chr12 21851126 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr12 24258197 24258197 0 0 Insertion 1 FN1540-S Chr12 24513920 24513921 0 0 Deletion 1 FN1540-S Chr12 25454977 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr12 26607112 26607113 0 0 Deletion 1 FN1540-S Chr12 4764436 4764443 0 0 Deletion 7 FN1540-S Chr12 5315490 5315490 0 0 Insertion 1 FN1540-S Chr12 6046886 6046886 0 0 Insertion 1 FN1540-S Chr12 9992697 9992709 0 0 Deletion 12 LOC_Os12g17424 retrotransposon protein, putative, unclassified FN1540-S Chr2 14305804 14305806 0 0 Deletion 2 LOC_Os02g24660 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr2 14551685 14551687 0 0 Deletion 2 FN1540-S Chr2 16589453 16589454 0 0 Deletion 1 FN1540-S Chr2 16761704 16761720 0 0 Deletion 16 FN1540-S Chr2 25544977 25544978 0 0 Deletion 1 FN1540-S Chr2 25564944 25564944 0 0 Insertion 22 FN1540-S Chr2 28165371 28165371 0 0 Insertion 14 FN1540-S Chr2 28613584 28613584 0 0 Insertion 52 FN1540-S Chr2 29084621 T-C 0 0 Single Base Substitution 0 INTRON Homo FN1540-S Chr2 29486601 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr2 3773884 3773899 0 0 Deletion 15 LOC_Os02g07330 expressed protein FN1540-S Chr2 8876043 8876049 0 0 Deletion 6 LOC_Os02g15750 expressed protein FN1540-S Chr2 9004995 9005008 0 0 Deletion 13 FN1540-S Chr2 9223591 9223602 0 0 Deletion 11 LOC_Os02g16230 expressed protein FN1540-S Chr2 9346930 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1540-S Chr3 12094166 12094167 0 0 Deletion 1 FN1540-S Chr3 13348416 13348417 0 0 Deletion 1 FN1540-S Chr3 13559989 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1540-S Chr3 16355128 16355148 0 0 Deletion 20 FN1540-S Chr3 24508700 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr3 25492868 25492886 0 0 Deletion 18 FN1540-S Chr3 27485722 27485724 0 0 Deletion 2 FN1540-S Chr3 2982898 3181507 0 0 Inversion 198609 FN1540-S Chr3 2982902 Chr2 26193205 0 Translocation 0 LOC_Os02g43400 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr3 3181515 3280355 0 0 Inversion 98840 FN1540-S Chr3 32216685 32216686 0 0 Deletion 1 FN1540-S Chr3 3280348 Chr2 26193894 0 Translocation 0 LOC_Os02g43400 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr3 7404429 7404429 0 0 Insertion 20 FN1540-S Chr4 10158058 10158064 0 0 Deletion 6 FN1540-S Chr4 12363255 12363255 0 0 Insertion 4 FN1540-S Chr4 1299323 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03120 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr4 14633790 14633791 0 0 Deletion 1 FN1540-S Chr4 2242568 2242568 0 0 Insertion 1 FN1540-S Chr4 23550883 23550884 0 0 Deletion 1 FN1540-S Chr4 268987 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1540-S Chr4 27287594 T-A 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr4 28299450 C-A 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr4 5038570 5038571 0 0 Deletion 1 FN1540-S Chr5 11182632 11182632 0 0 Insertion 2 FN1540-S Chr5 12827777 A-T 0 0 Single Base Substitution 0 INTRON Homo FN1540-S Chr5 1358777 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr5 15219045 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr5 22515160 27300379 0 0 Inversion 4785219 FN1540-S Chr5 22515186 27300419 0 0 Inversion 4785233 FN1540-S Chr5 24618489 G-A 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr5 26272127 26272128 0 0 Deletion 1 FN1540-S Chr5 27002677 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr6 21091100 21091101 0 0 Deletion 1 LOC_Os06g36070 expressed protein FN1540-S Chr6 22075505 22075505 0 0 Insertion 3 FN1540-S Chr6 23952746 23952753 0 0 Deletion 7 FN1540-S Chr6 25488349 25488350 0 0 Deletion 1 FN1540-S Chr6 26052870 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g43340 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr6 3785560 G-A 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr6 3785561 C-A 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr7 16124930 16124931 0 0 Deletion 1 FN1540-S Chr7 23785377 23785400 0 0 Deletion 23 LOC_Os07g39690 GCN5-related N-acetyltransferase, putative, expressed FN1540-S Chr7 23876059 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr7 23952032 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 12353779 12999858 0 0 Inversion 646079 LOC_Os08g20570 chloride channel protein, putative, expressed FN1540-S Chr8 12355081 12999888 0 0 Inversion 644807 LOC_Os08g20570 chloride channel protein, putative, expressed FN1540-S Chr8 13091286 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 13108028 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 13108029 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 14495079 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24050 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24060 retrotransposon protein, putative, unclassified FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24070 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24080 retrotransposon protein, putative, unclassified FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24090 hypothetical protein FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24100 retrotransposon protein, putative, unclassified FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24110 retrotransposon protein, putative, unclassified FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24120 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr8 14544001 14580000 0 0 Deletion 36000 LOC_Os08g24130 retrotransposon protein, putative, unclassified, expressed FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24540 retrotransposon protein, putative, unclassified FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24580 retrotransposon protein, putative, Ty3-gypsy subclass FN1540-S Chr8 14811001 14875000 0 0 Deletion 64000 LOC_Os08g24590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1540-S Chr8 19553328 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 20085411 20085411 0 0 Insertion 2 FN1540-S Chr8 22143805 22143818 0 0 Deletion 13 FN1540-S Chr8 22561780 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 22606823 22606859 0 0 Deletion 36 FN1540-S Chr8 22985603 22985613 0 0 Deletion 10 FN1540-S Chr8 24547563 24547571 0 0 Deletion 8 FN1540-S Chr8 2961197 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr8 5807996 5807997 0 0 Deletion 1 FN1540-S Chr8 6711427 6711453 0 0 Deletion 26 FN1540-S Chr8 7424005 A-G 0 0 Single Base Substitution 0 INTRON HET FN1540-S Chr9 22548434 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g39250 expressed protein FN1540-S Chr9 2990831 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1540-S Chr9 4014674 4014679 0 0 Deletion 5 FN1540-S Chr9 5294694 T-A 0 0 Single Base Substitution 0 INTRON HET