FN1554-S Chr1 13254024 13254026 0 0 Deletion 2 FN1554-S Chr1 16948631 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr1 22116364 22116365 0 0 Deletion 1 FN1554-S Chr1 25803339 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr1 27754348 27754356 0 0 Deletion 8 FN1554-S Chr1 36381547 36381547 0 0 Insertion 2 LOC_Os01g62810 regulator of chromosome condensation, putative, expressed FN1554-S Chr1 36464409 36464409 0 0 Insertion 2 FN1554-S Chr1 4367303 4367303 0 0 Insertion 2 FN1554-S Chr1 7693919 7693921 0 0 Deletion 2 LOC_Os01g13740 myb-like DNA-binding domain containing protein, expressed FN1554-S Chr10 13792240 13792242 0 0 Deletion 2 FN1554-S Chr10 17922061 17922063 0 0 Deletion 2 FN1554-S Chr10 2010528 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr10 2292864 2292864 0 0 Insertion 1 FN1554-S Chr10 2890734 2890742 0 0 Deletion 8 FN1554-S Chr10 3244482 3244512 0 0 Deletion 30 FN1554-S Chr10 3255073 3255073 0 0 Insertion 1 FN1554-S Chr11 13346591 13346607 0 0 Deletion 16 LOC_Os11g23180 hypothetical protein FN1554-S Chr11 14231151 14231151 0 0 Insertion 22 LOC_Os11g24990 retrotransposon protein, putative, unclassified, expressed FN1554-S Chr11 18907426 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr11 19384431 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr11 20080915 20080915 0 0 Insertion 2 FN1554-S Chr11 21442898 21442899 0 0 Deletion 1 FN1554-S Chr11 25450671 25452539 0 0 Deletion 1868 LOC_Os11g42250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1554-S Chr11 25452534 25578892 0 0 Inversion 126358 LOC_Os11g42250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1554-S Chr11 25579712 Chr9 20565249 0 Translocation 0 FN1554-S Chr11 25579992 Chr9 19944477 0 Translocation 0 LOC_Os09g33780 expressed protein FN1554-S Chr11 27659415 27659425 0 0 Deletion 10 FN1554-S Chr11 2939551 Chr7 21969606 0 Translocation 0 LOC_Os11g06170 bZIP transcriptional activator RSG, putative, expressed FN1554-S Chr11 5813408 5813410 0 0 Deletion 2 FN1554-S Chr11 6295651 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr11 945415 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr12 11938861 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr12 17219219 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g29070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1554-S Chr12 18166281 18166288 0 0 Deletion 7 LOC_Os12g30290 retrotransposon protein, putative, unclassified, expressed FN1554-S Chr12 2056798 2067093 0 0 Deletion 10295 LOC_Os12g04810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1554-S Chr12 2056798 2067093 0 0 Deletion 10295 LOC_Os12g04820 retrotransposon protein, putative, unclassified, expressed FN1554-S Chr12 26071999 26071999 0 0 Insertion 1 FN1554-S Chr12 2906249 2906254 0 0 Deletion 5 FN1554-S Chr12 4126526 4126541 0 0 Deletion 15 FN1554-S Chr12 7588384 7588545 0 0 Deletion 161 FN1554-S Chr12 8263885 8263886 0 0 Deletion 1 FN1554-S Chr2 12680934 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr2 13344261 13344273 0 0 Deletion 12 FN1554-S Chr2 17883880 17883880 0 0 Insertion 31 FN1554-S Chr2 17906217 17906219 0 0 Deletion 2 LOC_Os02g30140 expressed protein FN1554-S Chr2 21110653 21110653 0 0 Insertion 2 FN1554-S Chr2 24942021 C-T 0 0 Single Base Substitution 0 INTRON HET FN1554-S Chr2 29554654 29554654 0 0 Insertion 2 FN1554-S Chr2 30785368 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr2 3084119 3084120 0 0 Deletion 1 FN1554-S Chr2 31365862 31365866 0 0 Deletion 4 FN1554-S Chr3 10090494 10090501 0 0 Deletion 7 LOC_Os03g18080 SacI homology domain containing protein, expressed FN1554-S Chr3 10343657 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr3 1384813 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1554-S Chr3 17158642 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr3 29455391 29455400 0 0 Deletion 9 LOC_Os03g51479 maf, putative, expressed FN1554-S Chr3 645888 645889 0 0 Deletion 1 FN1554-S Chr4 12587350 12587351 0 0 Deletion 1 FN1554-S Chr4 16969354 16969354 0 0 Insertion 39 FN1554-S Chr4 2650300 2650307 0 0 Deletion 7 FN1554-S Chr4 26631641 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr4 26722658 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr4 26896651 26896653 0 0 Deletion 2 FN1554-S Chr4 27353442 27353442 0 0 Insertion 6 FN1554-S Chr4 29311579 29311581 0 0 Deletion 2 FN1554-S Chr4 3628621 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr4 4569039 4569040 0 0 Deletion 1 LOC_Os04g08470 OsFBX116 - F-box domain containing protein, expressed FN1554-S Chr4 600005 600015 0 0 Deletion 10 LOC_Os04g01960 expressed protein FN1554-S Chr4 600031 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN1554-S Chr5 12041253 12041262 0 0 Deletion 9 LOC_Os05g20510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1554-S Chr5 13135471 13135471 0 0 Insertion 1 FN1554-S Chr5 15725829 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr5 5399575 5399576 0 0 Deletion 1 FN1554-S Chr5 7154107 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1554-S Chr5 7189492 7189502 0 0 Deletion 10 FN1554-S Chr5 7207574 7207578 0 0 Deletion 4 FN1554-S Chr5 7349728 8145780 0 0 Inversion 796052 LOC_Os05g12804 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1554-S Chr5 7349728 8145780 0 0 Inversion 796052 LOC_Os05g14440 transposon protein, putative, Ac/Ds sub-class, expressed FN1554-S Chr5 7349846 8145817 0 0 Inversion 795971 LOC_Os05g12804 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1554-S Chr5 7349846 8145817 0 0 Inversion 795971 LOC_Os05g14440 transposon protein, putative, Ac/Ds sub-class, expressed FN1554-S Chr6 14561015 14561015 0 0 Insertion 1 FN1554-S Chr6 1477903 1477903 0 0 Insertion 6 FN1554-S Chr6 26526729 26526790 0 0 Deletion 61 FN1554-S Chr6 4165705 4165709 0 0 Deletion 4 FN1554-S Chr7 1158170 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1554-S Chr7 12084865 12084865 0 0 Insertion 1 FN1554-S Chr7 21969565 22107888 0 0 Inversion 138323 LOC_Os07g36920 OsFBX255 - F-box domain containing protein, expressed FN1554-S Chr7 7096262 7096263 0 0 Deletion 1 FN1554-S Chr7 7957228 7957228 0 0 Insertion 2 FN1554-S Chr8 1180561 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr8 1183001 1220000 0 0 Deletion 37000 LOC_Os08g02820 plant protein of unknown function domain containing protein, expressed FN1554-S Chr8 1183001 1220000 0 0 Deletion 37000 LOC_Os08g02840 ribosome, putative, expressed FN1554-S Chr8 1183001 1220000 0 0 Deletion 37000 LOC_Os08g02850 zinc finger family protein, putative, expressed FN1554-S Chr8 1183001 1220000 0 0 Deletion 37000 LOC_Os08g02860 transposon protein, putative, unclassified, expressed FN1554-S Chr8 1183001 1220000 0 0 Deletion 37000 LOC_Os08g02870 expressed protein FN1554-S Chr8 14287654 14287654 0 0 Insertion 2 FN1554-S Chr8 22791122 22791123 0 0 Deletion 1 FN1554-S Chr8 27227251 27247970 0 0 Deletion 20719 LOC_Os08g43080 POLD4B - Putative DNA polymerase delta complex subunit, expressed FN1554-S Chr8 27227251 27247970 0 0 Deletion 20719 LOC_Os08g43090 bZIP family transcription factor, putative, expressed FN1554-S Chr8 27227251 27247970 0 0 Deletion 20719 LOC_Os08g43100 hypothetical protein FN1554-S Chr8 8774924 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1554-S Chr9 19238103 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1554-S Chr9 19238104 C-A 0 0 Single Base Substitution 0 INTRON Homo FN1554-S Chr9 19746082 19746084 0 0 Deletion 2 FN1554-S Chr9 8815514 8815514 0 0 Insertion 5 LOC_Os09g14800 transposon protein, putative, unclassified, expressed