FN1556-S Chr1 16054754 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1556-S Chr1 16902509 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr1 22602931 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr1 26013566 26014227 0 0 Deletion 661 FN1556-S Chr1 28962461 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr1 37545585 37545586 0 0 Deletion 1 FN1556-S Chr1 6260669 6260674 0 0 Deletion 5 FN1556-S Chr10 2296033 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr10 3246058 3246058 0 0 Insertion 1 FN1556-S Chr11 21092149 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr12 10567518 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1556-S Chr12 13160603 15654255 0 0 Inversion 2493652 LOC_Os12g26710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1556-S Chr12 13160617 15654259 0 0 Inversion 2493642 LOC_Os12g26710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1556-S Chr12 13912591 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr12 13912592 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr12 14027300 T-A 0 0 Single Base Substitution 0 INTRON HET FN1556-S Chr12 17190377 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g29030 retrotransposon protein, putative, unclassified, expressed FN1556-S Chr12 19967854 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr12 20179144 20179144 0 0 Insertion 3 FN1556-S Chr12 20273415 20273415 0 0 Insertion 2 FN1556-S Chr12 8086645 8086645 0 0 Insertion 1 FN1556-S Chr12 982477 Chr1 11835703 0 Translocation 0 LOC_Os01g21210 retrotransposon protein, putative, unclassified, expressed FN1556-S Chr12 982485 Chr1 11836706 0 Translocation 0 LOC_Os01g21210 retrotransposon protein, putative, unclassified, expressed FN1556-S Chr2 12888972 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr2 13308213 13308218 0 0 Deletion 5 FN1556-S Chr2 14526017 14526018 0 0 Deletion 1 FN1556-S Chr2 16147394 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr2 17000809 17000809 0 0 Insertion 47 FN1556-S Chr2 26577556 26577558 0 0 Deletion 2 FN1556-S Chr2 30816847 30816851 0 0 Deletion 4 FN1556-S Chr2 31627041 31627045 0 0 Deletion 4 FN1556-S Chr2 34626689 34626690 0 0 Deletion 1 FN1556-S Chr3 12169676 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr3 18146623 18146629 0 0 Deletion 6 FN1556-S Chr3 18699629 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr3 1942987 1942988 0 0 Deletion 1 FN1556-S Chr3 23125839 23125839 0 0 Insertion 6 FN1556-S Chr3 25528256 25528256 0 0 Insertion 21 FN1556-S Chr3 25768971 25768971 0 0 Insertion 1 FN1556-S Chr3 28982499 28982499 0 0 Insertion 2 FN1556-S Chr3 2989542 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr3 2989543 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr3 2989544 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr4 12711656 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr4 13090814 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr4 13211524 13211525 0 0 Deletion 1 FN1556-S Chr4 13345833 13345837 0 0 Deletion 4 FN1556-S Chr4 14547660 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr4 16339023 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1556-S Chr4 19371078 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1556-S Chr4 22739525 22739526 0 0 Deletion 1 FN1556-S Chr4 22920551 G-A 0 0 Single Base Substitution 0 INTRON HET FN1556-S Chr4 28949468 28949468 0 0 Insertion 1 FN1556-S Chr4 35341328 35341328 0 0 Insertion 1 FN1556-S Chr4 3825208 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1556-S Chr5 13760205 13760217 0 0 Deletion 12 FN1556-S Chr5 16875749 16875749 0 0 Insertion 1 FN1556-S Chr5 19071866 19071866 0 0 Insertion 3 LOC_Os05g32580 glycine-rich protein, putative, expressed FN1556-S Chr5 2154092 2154093 0 0 Deletion 1 FN1556-S Chr5 24498360 24498361 0 0 Deletion 1 LOC_Os05g41830 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1556-S Chr5 27863457 27863457 0 0 Insertion 4 FN1556-S Chr5 29560011 29560014 0 0 Deletion 3 FN1556-S Chr5 3579783 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr5 4841142 4841143 0 0 Deletion 1 FN1556-S Chr5 5500194 5507540 0 0 Inversion 7346 FN1556-S Chr6 10332334 10332334 0 0 Insertion 1 LOC_Os06g17820 retrotransposon protein, putative, unclassified, expressed FN1556-S Chr6 2817414 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr6 29190528 29190532 0 0 Deletion 4 FN1556-S Chr6 6182767 6228647 0 0 Inversion 45880 LOC_Os06g11750 hypothetical protein FN1556-S Chr7 17853750 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1556-S Chr7 2396868 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr7 24240074 24240074 0 0 Insertion 31 FN1556-S Chr7 26843150 26843162 0 0 Deletion 12 FN1556-S Chr7 28335216 28335218 0 0 Deletion 2 FN1556-S Chr7 5227722 5227733 0 0 Deletion 11 FN1556-S Chr7 8067604 8067613 0 0 Deletion 9 FN1556-S Chr8 15307845 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1556-S Chr8 1698119 1698142 0 0 Deletion 23 FN1556-S Chr8 18347535 C-A 0 0 Single Base Substitution 0 INTRON Homo FN1556-S Chr8 19010561 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1556-S Chr8 27625588 27625590 0 0 Deletion 2 FN1556-S Chr8 3943340 C-T 0 0 Single Base Substitution 0 INTRON HET FN1556-S Chr9 18399984 18399985 0 0 Deletion 1 FN1556-S Chr9 4100788 4100788 0 0 Insertion 1 FN1556-S Chr9 5571354 5571355 0 0 Deletion 1 FN1556-S Chr9 670378 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1556-S Chr9 8846950 8846950 0 0 Insertion 42